Vibrio tarriae: CEQ48_18720
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Entry
CEQ48_18720 CDS
T08683
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vti03032
]
CEQ48_18720 (gyrB)
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_18720 (gyrB)
Enzymes [BR:
vti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CEQ48_18720 (gyrB)
DNA replication proteins [BR:
vti03032
]
Prokaryotic type
DNA Topoisomerases
CEQ48_18720 (gyrB)
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CEQ48_18720 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
TcaA_2nd
Motif
Other DBs
NCBI-ProteinID:
ASK56658
UniProt:
A0AAU8WK67
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Position
1:2815859..2818276
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AA seq
805 aa
AA seq
DB search
MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIV
VTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKVLLTIYRGGKVHTQTYHHGVPQAPLAVVGDTERTGTTVRFWPSAQTFTNIE
FHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKV
FHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDK
EGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLAD
FLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKK
GKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSR
RYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNSELNV
YLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISSF
AAALEWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPDTRRMMQVTIEDAVGADELFTT
LMGDQVEPRRAFIETNALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaattacgattcatcgagtattaaggtactgaagggtctggatgcggtacgt
aagcgtccgggtatgtacatcggcgacactgatgatggcaccggtctgcaccacatggtt
tttgaggtggtggataactcaattgatgaagcgttggcaggttactgtaaagacatcgtg
gtcaccatccacgaagacaactcagtgtcagtcagcgatgacggtcgtggtatcccgacc
gaaatgcatcctgaagagaaagtgtctgcggcagaagtcatcatgactgtactgcacgcc
ggcggtaaatttgacgacaactcctataaagtctccggcggtctgcacggggtaggtgtg
tcggtggttaacgcgctctctgaaaaagtgctactcaccatctatcgcggcggcaaagtc
cacacccaaacttaccatcatggtgtgccacaagcaccgttggctgtagtgggtgatact
gagcgtaccggtactaccgtacgtttctggccaagcgcacaaacctttaccaatatcgaa
ttccattacgacattttggctaaacgcctgcgtgagctgtcattcctgaactctggcgtg
tcgatcaagctgaccgatgaacgtgaagaagataaaaaagaccacttcatgtatgaaggg
ggtattcaagcgtttgtgacccacttgaaccgtaacaaaacgccaatccatgagaaagtc
ttccactttaaccaagagcgtgaagatggcatcagcgtggaagtggcaatgcagtggaac
gatggtttccaagaaaacatctactgctttaccaacaacatcccacagcgtgatggtggt
acccacttagccggtttccgtggtgcgttgacccgtactttgaacaactacatggacaaa
gaaggcttctcgaagaaagcccaagcggcaacctcgggtgatgatgcgcgtgaaggctta
acggctgtggtatcggtgaaagtgccggatcctaaattctcaagccaaaccaaagataag
ctggtttcttcggaagtaaaatccgcggttgagtcagccatgaatgagaagctggcggat
ttcctagcggaaaacccaagcgaagcgaaaaacgtttgttcgaagattattgatgcggcg
cgtgcgcgtgaagcagcgcgtaaagctcgtgaaatgactcgccgtaaaggtgcactggat
cttgcaggcttacccggcaaactggcggactgtcaggaaaaagacccagcattgtctgaa
ctctacatagtggagggtgactctgcgggcggttcagccaaacaaggccgtaaccgtaag
aatcaagcgattctgccgctgaaaggtaaaatcctcaacgtagaaaaagcgcgttttgac
aagatgttgtcttcacaagaagtcgcgaccctcatcactgcattaggctgtggtatcggc
cgtgatgagtacaacccagataaactgcgttatcacaacatcatcatcatgaccgatgcg
gacgtcgacggctcgcacattcgtactctgctgttgaccttcttctaccgccaaatgccg
gagttgattgagcgtggttacatctacattgctcagccaccactttacaaagtgaaaaaa
ggcaaacaagagcagtacatcaaagatgaagaggcgatgaaccagtaccaagtggcactg
gcgatggatggcgcagagctgcacgtgaacgccgatgctcctgcattggcgggtgaaccg
ctggagaagctggttcagcaatataacgccgcgatcaagctggttgagcgcatgagccgt
cgctatccttacgcgatgctgcatgagctgatttacgtaccacgcatcaatgctgagctg
tgtgccgataaagccgcggttgaagcttggactcagcgtttagtggaacagctgaatgcg
aaagaagtgggcgcgagccaatacagcgttctggttgaacataattcggagctgaatgtg
tatctgccaaaaattcaggtgcgtactcacggtgtgacccatgaatacttactgagcgcg
gatctgattaactcgaaagagtacgctaagttagccgatctgtcggaagcgctggacggt
ttgattgaagcgggtgcgtttatcaaacgtggtgaacgtgttcagccaatcagtagcttt
gccgctgcacttgagtggttaatcaaagaatcgcgtcgcggtctgtctatccagcgctat
aaaggtctgggtgagatgaacccagatcagttgtgggaaaccaccatggatccagacact
cgtcgtatgatgcaagtgaccatcgaagatgcggtaggcgcggatgagctgttcacgacg
ctcatgggtgatcaagttgaaccacgtcgtgcatttatcgaaaccaacgcactgaaagtg
gccaacctcgacgtataa
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