Vibrio tarriae: CEQ48_19460
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Entry
CEQ48_19460 CDS
T08683
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vti03021
]
CEQ48_19460 (rpoH)
Transcription machinery [BR:
vti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEQ48_19460 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_10
UCR_14kD
HTH_25
VpsR
ORF6N
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ASK56787
UniProt:
A0AAU8WLF8
LinkDB
All DBs
Position
1:2953759..2954619
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AA seq
286 aa
AA seq
DB search
MTNQAYPMALVSQDSLDSYIRSVNGYPMLSADEERELAERLHYKGDIDAAKDLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNSEVETVARELGVEPAEVREMESRLAAQDA
AFEMSAEDDENGMAYTAPVLYLEDKHSDLADNLEAENWEVHTTQRLSMALASLDERSQHI
VRARWLDDDNKTTLQDLAEMYGVSAERIRQLEKNAMRKLKEAVGEF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccaagcgtatccaatggctcttgtttcccaagacagcttagatagctacatc
cgttcagtaaacggttacccgatgctgagtgctgatgaagagcgcgagctggcagagcga
ttacattacaaaggggatatcgatgctgcgaaagacttgatcttgtcgcacctacgattt
gttgttcacgttgctcgtggttattccggttatggcttgccaatggcggacttagtgcaa
gagggcaatatcggtctgatgaaagcggtcaaacgctttaaccctgagatgggggtaaga
ctggtgtcgtttgcggtgcactggattaaagccgaaattcatgaatatgtgctacgtaac
tggcgtattgtgaaaatcgccaccaccaaagcacaacgcaaactgttctttaatctgcgt
aaatcgaaaaaacgccttggctggtttaataacagcgaagtggaaacggtagcgcgcgag
ctgggtgttgagcctgctgaagtgcgtgaaatggaatctcgtctggcagcccaagatgct
gcgtttgagatgtccgccgaggatgacgaaaacggcatggcctatactgcgcctgtgctg
tacctcgaagataagcactctgacttagctgataacctagaagccgaaaactgggaagtg
cataccacacagcgcctcagcatggcgctggcgagtcttgatgagcgtagccaacacatt
gtgcgtgctcgttggttggatgatgacaacaaaaccacactgcaagatttggcggaaatg
tatggtgtttctgcggagcgtattcgtcagcttgagaaaaacgccatgcgtaagctgaaa
gaagcggtgggcgagttctga
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