Candidatus Vallotiella hemipterorum: MYVALT_C_00270
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Entry
MYVALT_C_00270 CDS
T07343
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
vtr
Candidatus Vallotiella hemipterorum
Brite
KEGG Orthology (KO) [BR:
vtr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MYVALT_C_00270 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vtr03021
]
MYVALT_C_00270 (rpoD)
Transcription machinery [BR:
vtr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MYVALT_C_00270 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CAG7599182
UniProt:
A0A916NLG5
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All DBs
Position
1:424762..426807
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AA seq
681 aa
AA seq
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MATSMTKKLNKVLLNKEMKQLDESAGSFTTVKGEKIKARDRRAKEKALLKDAFASRQPGT
AEELEERRSKLRALIKLGKERGFLTYSEINDHLPDNFAETEAIESIISTFNDMGVAVYEQ
APDAETLLLNDNAPSLSSDDEVEEEAEVALSSVDSEFGRTTDPVRMYMREMGTVELLTRE
GEIEIAKRIEDGLKHMVRAISACPTTIIDILAMAKRVTSDEIRVDELVDGLIDPNTEDII
SASDADEMASESDRTDTSHEEGDGGGAGADAASTAQLDALKHASLERFALISEWFEKMRL
AYEKEGYKSQLYLRARDAIQTELTLIRFTARTVERLCDTLRMQVDEVRQVERQILHIVVN
KCGMSREEFAWRFPGNETNLDWAEQIIIEGPPYGAVLARNIPAIREQQQRLINLQARVVL
PLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLM
KAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQE
TGLEPDPGTLAEKMEMPEEKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNNTLAPAD
AALHESMRDVVKEVLDLLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAK
ALRKLRHPSRSDKLKSFLEGN
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccatgacaaaaaagctgaataaagtactacttaataaggaaatgaagcaa
ctcgatgagtcggccggctcattcacgacagtgaagggtgagaagattaaagcgcgtgat
cgcagggcgaaggaaaaagcactgctaaaagatgcatttgcatctcgtcaaccaggtacg
gctgaggagcttgaggagcgccgctcaaagcttcgggctctgattaagctaggcaaagaa
agaggcttcttaacctattctgaaattaatgatcacctaccagacaattttgcagaaact
gaggcgattgaaagcattattagcacgtttaatgatatgggcgtggcagtttatgaacag
gcacctgatgcagaaactctgctacttaacgataatgcgccttcgttatcgtccgacgac
gaagttgaagaggaggccgaggtcgcattatcatcagtagactctgaattcggtcgcaca
acagatccggtgcgtatgtacatgcgagagatgggtactgttgagctattgacgcgagaa
ggtgaaattgaaattgctaagcgtatcgaagacggtcttaagcatatggtccgggcaatt
tcagcttgcccaacgacgattatagacatccttgcgatggctaagcgggttactagtgat
gaaatccgtgtagacgaactagtcgatggcctcatagatccaaatacagaggatataatt
agtgcatctgatgcagatgagatggcatcagaatctgatagaacagacacgagccacgaa
gaaggagatggggggggtgctggagcggatgcagccagcactgcgcagcttgatgcgctg
aagcacgcctctctagagcgctttgctctaataagcgagtggtttgaaaaaatgcggctt
gcatatgaaaaggaggggtataagtctcagctatacctaagggcgcgagatgctattcaa
acagagttaacattgatccgatttactgctagaacggttgaaagactatgcgatacgttg
cgcatgcaggttgatgaggtacgtcaagtagaacgacagatcttacatattgtcgtcaat
aagtgtgggatgtcacgcgaagaatttgcctggcgcttccctggtaatgagactaattta
gactgggcagaacagattattatagaggggccgccctatggagcagtacttgcgcgaaat
atccccgcaattcgcgaacagcagcagcgattgattaacttgcaggcgcgcgttgtattg
ccgctaaaagacctgaaagaaacaaatcgccaaatggcggcaggcgagctcaaagcaagg
caagctaagcgcgagatgactgaggccaacttgcggctagttatttctattgcgaaaaaa
tacacgaatcgtggtttgcaatttttagatttgatccaggaaggtaatataggcttaatg
aaagcggttgataagtttgaatatcggcggggctataagttctctacgtatgcgacatgg
tggattcgtcaggcgattactcgatcgattgcagatcaggctcgtacgatacgaattccg
gtgcatatgatcgagacaattaataaaatgaatcggatatcacggcaaatcttgcaagaa
acaggtctcgagcctgatcctggcacacttgctgaaaaaatggagatgccagaagaaaaa
atccgaaagattatgaagatcgcaaaggagccaatttctatggaaaccccgatcggcgac
gacgacgattcacatttaggtgattttatcgaagataacaatacactagcaccagctgat
gccgcattacacgagagcatgcgagatgtcgtcaaagaggtgttagatttattaacaccg
cgtgaagcaaaagtattgcgaatgcgctttggaattgagatgagtacagatcatacgctt
gaagaagtcggtaaacagttcgatgtaacacgagagcgaatccgccagatcgaggcaaag
gcattacgtaaattgcgtcatccaagccgttcagataaactaaagtctttcttggaggga
aactaa
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