Candidatus Vallotia tarda: MYVALT_F_00880
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Entry
MYVALT_F_00880 CDS
T07343
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vtr
Candidatus Vallotia tarda
Pathway
vtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYVALT_F_00880 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vtr03019
]
MYVALT_F_00880 (pcnB)
Enzymes [BR:
vtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MYVALT_F_00880 (pcnB)
Messenger RNA biogenesis [BR:
vtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MYVALT_F_00880 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CAG7600151
UniProt:
A0A916JT13
LinkDB
All DBs
Position
1:complement(547556..549160)
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AA seq
534 aa
AA seq
DB search
MFSLRCGDNDKDRANANPNIAIADHCYGMGQDEQCNVPSEALAVQDAGLPPSKPSNGMLY
PTRAISKYTSRHTLASYEAKIPVIVSADIHHIDLSLISHNAIRVTHMLQKSGFQAFIVGG
AVRDLLLNIVPKDFDVATDATPNEIVKIFRRARLIGRRFQIVHVQFGAEIIEVSTFRAPI
EITPVGAKESSDSKPNALSHKMRCSINRRMHAVDSSGRVLRDNVWGKQHQDATRRDFTIN
AMYYDPVMQIVLDYHCGMDDIRGRVLRMIGEPATRFREDPVRMLRTVRFAAKLDFIIEPS
TQAPLAELVYLINNIPAARLFDEILKLLLSGYAHNCLKQLRALGLHHRVFPLLEVTLEQP
DGEQFIMLALTNTDERVRSGKQVSPGFLFASLLWHAMQLRWKQYEASGEPSIPALYQALD
EVLDQQTAMLAIRRRYTTDMREILELQPRLEKRSGRSALKLIEHHSFRAGYDFLLLRCEA
GELDESICQWWKDFIAGDPNFREVMLKQREKERQNRRRRGSGSRNRKNSSANIL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgttcagcttacgatgcggcgataacgataaagatcgcgcaaatgctaacccgaacatc
gctatagcagaccattgttacggtatgggacaggacgagcaatgcaacgtaccgtctgag
gcgctggcagtgcaggatgctgggctgccgcctagcaagccatcgaatgggatgttgtac
cccacccgggctattagcaaatataccagcagacatacgctcgctagctatgaagccaaa
ataccggtgatcgtttcagccgatatccatcatattgatctatcgttgatctcgcataac
gcaatccgtgtgactcatatgctccagaaatctggttttcaagcattcatcgttggcggc
gcggtacgcgatcttctgcttaatattgtaccaaaagattttgatgtcgctacagatgca
acgcctaatgagatcgttaaaatattccgacgcgctcggttaatcggccggcgttttcag
attgttcatgttcagttcggggctgagattatcgaggtatcaacgttccgtgcgccaata
gagataacgccagtcggtgctaaagaaagctcagatagcaagcctaatgcgctgtcgcac
aagatgcgatgtagtataaaccggcgtatgcatgcggtagactcaagcgggcgcgttttg
cgcgataatgtctggggtaaacagcatcaggatgcaacacgtcgcgacttcactatcaat
gcaatgtactacgatccagtgatgcaaattgtactggattaccattgcgggatggacgac
attcgtggacgagtactccgaatgattggagagccggctacccgctttcgcgaggatcct
gtcaggatgctgcgtactgtacgtttcgcagctaaactggattttataattgaaccatca
acgcaggcgcctcttgctgaattagtgtatttaattaataacataccggctgcgcgactg
tttgacgagattcttaaacttctgctttctggatatgcacataactgcttaaagcagtta
cgtgcgctaggcttgcatcacagagtgtttcctcttttagaggtaacacttgagcagcca
gatggagagcagtttattatgcttgctctaactaataccgatgaacgcgtacgatccggt
aaacaggtctcaccaggttttttatttgcgtcgttgctatggcatgcaatgcaactacgc
tggaagcaatacgaggctagcggtgaaccttcgattccggctctatatcaagctttagat
gaggtgctagaccagcaaactgcaatgcttgcgatacggagacgatataccaccgacatg
cgtgaaatattggagctccagccacggctggagaagcgctccggtcgcagtgcgttaaaa
cttatagagcatcatagttttagggcgggttatgattttctcttgttacgctgcgaagcg
ggcgagctagacgaatctatctgtcaatggtggaaagattttatcgctggcgatccgaat
tttcgagaggtgatgctgaaacagagggaaaaagaacgccagaaccgccggcggcgcggc
agcggctcacgtaaccgtaaaaattctagcgcaaatatcttatag
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