Candidatus Vallotiella hemipterorum: MYVALT_F_01460
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Entry
MYVALT_F_01460 CDS
T07343
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vtr
Candidatus Vallotiella hemipterorum
Pathway
vtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYVALT_F_01460 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vtr03019
]
MYVALT_F_01460 (rhlE)
Enzymes [BR:
vtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MYVALT_F_01460 (rhlE)
Messenger RNA biogenesis [BR:
vtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MYVALT_F_01460 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
CAG7600694
UniProt:
A0A916NM17
LinkDB
All DBs
Position
1:complement(630708..632228)
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AA seq
506 aa
AA seq
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MSERSHIALDLNTTSRSILTEARVSCGIAVSSSVPVSFPLSFDEFGLSALIVRSVIEQGY
VKPTPIQAQAIPAVLAGRDVMGAAQTGTGKTASFALPIIQRLFPLASLSASPARHPVRAL
ILTPTRELANQVATNVHRYAKYTSLRSTVIFGGVDINPQVAELRRGVEIVIATPGRLLDH
IQQKSTSLAQVQILVLDEADRMLDMGFLPDLQRILNLLPREKQTLLFSATFSAEIKKLAA
TYLRNPVTIEVARSNSAAENVRQIVFEVSEPNKQAAILQLIRQRKLKQVIIFCNSKIGAS
RLARQLTRDGIIATAIHGDRSQSERMQALEAFKLGTIEALVATDVAARGLDIVELPAVIN
FDLPFNAEDYVHRIGRTGRAGASGDALSLYNVNECKQLTDIENLINRKFTLQPLELHRST
SRNSSHERVDCNDRRRNRHDDVSNRVRSSIPDAKLVDDFFTKPYEPSFSVCQIANYEEQN
PVLDKKLPKQRLAALLGGFGMPRRDS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaacgctcacatatagcattagatctaaatactacctcgcgttccattctaact
gaagcacgagtttcttgtggtatcgccgtttctagctcagtaccagtgtcttttccattg
tcatttgatgaatttggcctttctgcgttaatcgttcggtcagtaatagaacagggctat
gtaaaaccaacgccgatccaggctcaggcgatcccagctgtgctagctggccgagacgtc
atgggtgcagcgcagaccggaacaggtaagacagctagctttgcactaccaattattcaa
cgcttgtttccacttgctagtcttagtgcatctcccgcacgccatccagtacgagcactt
attttgacccctactcgagaacttgcaaatcaagtagcaactaatgtccataggtatgct
aagtacacatcattacgcagtacagtcatatttggcggtgtcgatatcaatccacaagtg
gctgaattgcgccgtggtgtcgagatcgtaatcgcgacacccggtcggctacttgatcat
attcagcaaaaaagtacgtcattagctcaggtgcagatacttgtactcgacgaagctgat
cggatgcttgacatgggcttcttaccagacttgcagagaatcctaaacttgttgccacgt
gaaaaacagaccttgttgttttccgcgacattctccgctgagattaaaaaactcgcagcg
acttacttacgcaatccggttacgattgaagtagctcgtagtaattcagcagctgagaat
gttcggcaaatcgtctttgaagtgtccgagcctaataagcaagcggcaatccttcagtta
atccgtcagcgtaaattaaagcaagtaattattttttgcaacagtaagatcggagcaagt
cggctggcaaggcaactcacgcgcgatggcataatagctaccgcaattcatggggatcgc
tctcaaagcgagcgaatgcaggcgttagaggcatttaagctcggaacaattgaagcgtta
gttgcaaccgatgtagccgcccgaggactagatattgtagagttgccggctgtaatcaat
ttcgatttgccatttaacgcggaagactatgtgcatagaatcgggagaacgggtcgtgct
ggggcatccggtgatgcgttgtcattgtacaatgtcaacgagtgtaaacaactgacggat
attgaaaatttaattaaccgcaagttcactcttcaacctctcgagttacaccgatcaaca
tctcggaacagctcgcatgaacgtgttgattgtaacgaccgtcgtcgtaatcgacatgat
gatgtttctaaccgggtacgctcatcaatacctgatgccaagctagttgatgacttcttt
acgaagccatatgagccctcattttcagtctgccaaatagcaaactatgaagagcagaat
ccggtactcgacaagaaattacctaagcaacgattagctgcgctattaggcggattcggc
atgccgcgtcgggattcttaa
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