KEGG   Candidatus Vallotia tarda: MYVALT_G_02230
Entry
MYVALT_G_02230    CDS       T07343                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vtr  Candidatus Vallotia tarda
Pathway
vtr00740  Riboflavin metabolism
vtr01100  Metabolic pathways
vtr01110  Biosynthesis of secondary metabolites
vtr01240  Biosynthesis of cofactors
vtr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vtr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    MYVALT_G_02230 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MYVALT_G_02230 (ribD)
Enzymes [BR:vtr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     MYVALT_G_02230 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     MYVALT_G_02230 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD SNAD4
Other DBs
NCBI-ProteinID: CAG7597941
UniProt: A0A916NEM6
LinkDB
Position
1:complement(258215..259363)
AA seq 382 aa
MFSDFDRLHMQHALALAERGLYTTSPNPRVGCVLVKDGQIIGEGFTQPAGQDHAEVCALK
DARSRGHTPIGSTAYVTLEPCSHLGCTPPCANTMIEAGISGVIAAMVDPNPQVSGRGLAM
LHNAGIEVHCGLLAQEARELNIGFISRMTRGIPWVRLKIAATLDGCTALPDGQSQWLTSN
ASRIDGHAWRARSCAALTGIGTVRKDNPQMNVRAVLTPRQPLRVLVDSRLNVPLDSRILS
GIPPLIVCESDDGECAHRAHFLRKAGAEVIALPNPAGKVDLQAALRMLAARGINELHVEA
GYRLNGSLLREGWVDELLLYIDPALLGNAIGMFNLVPPLVLDQRIRLRYHSVKQIGEDLR
VLARPVLASASDNLSHMGDARS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgttctcagactttgatcgcctacatatgcagcacgcgctcgcgctggcagagcgtggg
ttatatacaacatcgccgaatccccgagttggctgtgtgcttgttaaggatgggcaaatt
attggagagggcttcacgcagcctgctgggcaagaccacgcagaagtgtgcgcactaaaa
gatgcccgctcaagggggcacacccctattggctctaccgcttatgtaacgctagagccc
tgcagccaccttggttgcacaccaccctgcgccaataccatgatagaagctggaatttct
ggagtaatagctgcgatggtggatccaaacccgcaagttagcggccgtggattagctatg
ctgcataatgctggcatagaggtacattgcggactgcttgcgcaggaggctagggagctg
aatatcggattcatatctcgaatgacgagaggcattccatgggtgcgccttaagatcgcc
gcgacactagacggttgcaccgcattgccagatggccaaagccaatggcttacatcaaac
gcctcacgcatagatggacacgcatggcgagcacgctcatgtgcggctcttactggtatc
ggcacggtaagaaaggataatccgcagatgaacgtgcgtgcagtactcacgccccgccaa
ccgcttcgcgtattggtagacagccgtctaaacgtgccgctagattccaggatcttatct
ggcataccgccgcttattgtatgcgagagtgatgatggagaatgtgcccatcgggcacat
ttcttacgcaaagctggtgccgaagtaattgcattaccgaacccggccggcaaggttgac
ttgcaagcagcgctacgaatgctagctgcgcggggtattaatgagttacacgtcgaggct
ggttataggcttaatggctcactattacgcgaaggctgggttgatgagttgcttctctac
attgacccagctcttctcggcaatgcgataggcatgtttaacctagtgccgccattagtg
ctcgatcaaaggatacggctacgctatcattcagttaagcagatcggtgaagatctacgg
gtcctagctaggccagtattagcgtctgcatctgataacttatcgcacatgggcgacgca
cgctcgtaa

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