Candidatus Vallotiella hemipterorum: MYVALT_H_00080
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Entry
MYVALT_H_00080 CDS
T07343
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
vtr
Candidatus Vallotiella hemipterorum
Pathway
vtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYVALT_H_00080 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vtr03400
]
MYVALT_H_00080 (recB)
Enzymes [BR:
vtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MYVALT_H_00080 (recB)
DNA repair and recombination proteins [BR:
vtr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYVALT_H_00080 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAG7605230
UniProt:
A0A916JXI4
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All DBs
Position
pMVTALT:complement(24541..28269)
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AA seq
1242 aa
AA seq
DB search
MSLDVFELDVFTCRLDGVTQIEASAGTGKTWNICALYIRLLLEKNLQANQILVVTFTKAA
TAELREKIRLRLIQLEKSLALGDPVFTELIRRIVDAKTPEIATQYALRQIRQALNSFDQA
AIYTIHSFCQRALQESPFAAAMPFSFEIEADDTALRFDVSAQFWREHVEREAARSTGFAH
WLISHGAAPTALQALLDQRLKKPLAKIVWTDPVCDVTVDMTLDHFKRIVNLWLAERKQIS
KWLLNSSAQLNQRTHNPAHIQEALEAWERFFVRGNRYAPLPKEALKLTSSSLIAATKVKC
QPPIHAFSDCANALVSALCVEHTTHLRLWFSLVRKWLRIGPSIIAQRKREARVMSFNDLP
SSLYDALHSHSWLVDALRERYLAALIDEFQDTDPLQFGIFHQIFAPKGPLFLVGDPKQAI
YSFRGADLHTYLNARTHVHARYTLAINQRSDATIVSACNRLFSNNSYAFVLDGLDYHPVR
SGIRSRLKFLDRRDPLSITHGTRAALRVWWLPDHPILNKCDAQYAAAEACAAEVARLICD
ARGGNVLIGSKPLAPADIAVLVQTHRQGMLIKQVFHKYSIGSVELAQASVFKSFDAEQFE
RLFLAIDTPGDLQRLRAALSTDWIGLDATTLWAMDQAESAQPESNQSYSICLEMNSVAWV
ELFSSYRRLWQEHGFAPMWRIVLRDLRITMRLANLDDSKRRITNMNHLAELIQARDNEYP
GIAPTLCWLSAQRADPGISDDTQLRLESDSDLVQIVTIHKSKGIEYPVIFCPFLSNGALG
ATHLYETLSAAREYYCDDGLAILHFGCDDEEAQRIDRSVMREQAAERVRLIYVAITRAVY
RCYLVAGIYTSGAHKSTKESRQSVLNWLVSGGGVHFNKWLNTPPEAAALEKCWQALQNDK
DSGIAIVPLPTVAPCDVLLPLVNTSHALVRTPILARRLFKTWKISSFSSLAMTRQRLLPD
NDDILHVRPDYDNDITRVDIQAITLEAETIPDSKIIKLDSDDILNFPRGPTAGDCLHRLM
EIANLHDPLSWPAAIVGALADRPVNSPTLSRLQLTTMMMRLLRDIAHTQLETEFTLGELD
PSHRLTELEFVFPVTSLDISRFSIMLEEHGIVGVALSHGILHGYLKGFIDAVVKFRDQFW
IIDWKSNYLGNLPSAYHTHVLSSVMDAHSYRLQALIYTIAIHRYMQSRVKDYDYETHFGA
TLYLFLRGVRPDWPGAGISRFRPTLDAIKAFDALFSAKDRHV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgacgtgtttgaactcgatgtttttacctgcagactcgatggggtgacccag
atcgaggcctctgctggtactgggaaaacttggaatatctgtgcgctttatatccgttta
ttacttgaaaagaacctgcaagcaaaccagattttggttgtaacctttacgaaagccgct
accgcggagctgcgcgagaaaatacggttgcgtttaatacaactcgaaaaatctctcgca
ctgggtgacccagttttcactgagctcatccgacgtatcgtagatgctaagacgccagaa
atagctacgcaatatgcactaagacagatccggcaggcgttgaatagtttcgatcaggct
gcaatctatacaattcattcattctgccagcgtgcgctgcaagaatcgccatttgcggct
gcaatgccgttctcgtttgagattgaagctgacgatactgcactaagattcgatgtctcc
gcgcagttttggcgtgagcatgtagaaagggaagcggcacgttcgactggatttgcacac
tggcttatctctcatggcgctgcacctacagctttacaagcactactcgatcaacgccta
aaaaaaccactagccaaaattgtatggaccgacccagtgtgtgatgtgacggttgatatg
acgcttgatcattttaagcgtattgttaatctatggcttgcagagcgaaagcagatctcg
aagtggcttctcaattcttctgctcaattaaaccagcgcacacataatccagctcatata
caagaggcgctagaggcatgggaacgcttttttgttcgtggcaatcgctatgcgccgctt
ccgaaggaagcactaaagctaacttcgtcttcactcattgctgcaacgaaggttaaatgc
cagccacctatacatgctttctcagactgtgcaaatgcgttagtttctgcactgtgcgta
gagcacacgacgcatcttcgtctttggttttccctcgttcgtaaatggttgcgtatcggg
ccatcgattatcgctcaacgcaagcgcgaggcgcgagttatgtcttttaatgacttgcca
tctagcttatatgatgcgctgcattcacatagttggcttgttgatgccctacgtgagcgc
tatttagcagcgttaatcgatgaattccaggatacagacccattgcaatttggcatcttt
caccagatttttgccccgaaaggtccattgtttctcgttggtgatccaaagcaagcgatc
tatagttttcgcggggccgatttacatacatacctaaatgctcgtactcatgttcatgct
cgctatacgctagctatcaatcagcgctccgatgcaacaatagtttctgcatgcaaccga
ttatttagtaataattcttatgcctttgtgcttgatggacttgactatcatcctgtgcgt
tctgggataagatcacgtctaaaatttttggaccggcgcgatccgctctctataactcat
ggtactagagcggccctaagggtatggtggctaccagatcatcctatacttaataagtgt
gatgctcaatatgcagccgctgaagcgtgcgcagcagaggttgcgcggcttatatgtgat
gcgcgtggtggcaatgtactaattggcagtaagccgttagcaccggcagatatcgccgta
cttgtacagacgcatcggcagggtatgttgataaaacaagtatttcataaatatagtatc
ggtagtgtagagcttgctcaagcctcagtatttaagtcgttcgatgccgaacagttcgaa
cgtctttttctggcaatcgatacaccaggtgacttgcagcggttgcgtgcggctctatct
acagactggatcggtttagacgctacaacattatgggctatggaccaagccgagtcagcg
cagccagaatccaaccaatcttattcaatctgcttagaaatgaactcagtagcgtgggtg
gaactcttttcaagctatcggcggctttggcaggagcacggctttgcaccgatgtggcgc
attgtattgcgtgatttgcgtattacaatgcgcttagcaaacttagatgatagtaagcgc
aggataactaacatgaatcatctagctgaactaattcaggcgcgcgataacgaatatcca
ggtatcgcgccaaccctgtgttggctgagtgctcaacgagcggacccaggcatcagcgat
gatacacaattgcgtctagaatcagattctgatcttgtccagattgttacaattcataag
tctaaggggatagaatatcctgtgatattttgtccgttcctgagcaatggcgcattaggt
gcaacacacctatacgagacattatcggcagcgcgcgagtattattgtgatgatggactt
gctattttacactttgggtgcgacgatgaggaagcacagagaattgatcgaagtgtaatg
cgtgaacaggctgctgagcgtgtacggctaatctatgtcgcgatcacgcgcgcagtatat
cgatgctatcttgtagcgggaatttatacgagcggtgctcataaatcaacaaaagagtcg
cgccagagcgttctgaattggcttgtttctggtgggggagtgcatttcaataaatggtta
aatacgccgcccgaggcggccgcattggaaaaatgctggcaagcattgcaaaatgataaa
gattctggtatcgctattgtacctctaccaaccgtagccccctgtgatgtgctgttacct
ctagttaatacgtcgcacgcgttagttcgtacacccattctggctcgtcgtctctttaag
acttggaaaatttcgagtttcagctcactcgctatgacgcggcagagattattaccagat
aatgacgatatattacatgtaagaccagattacgataatgatattactcgagttgatata
caggcaattacattggaagcggagactattcctgatagtaaaataattaagctggattct
gacgatattctaaacttcccccggggaccaaccgcaggcgattgtttacatcggttaatg
gagattgctaatcttcatgatcctttgagctggcccgctgctatcgtaggcgcactcgct
gatcggccagtgaattcgcctactttaagtagattacagcttactactatgatgatgcgt
ctattacgggatattgcgcatactcaacttgaaacagagttcacgcttggagagctagat
ccatcacatcgattaactgagcttgaatttgtttttccagttacatctcttgacataagc
cggttttcaataatgcttgaggagcatggtattgtcggggtagctcttagccatggtatt
ttacatggttacctgaaaggatttatcgatgctgtggttaaattccgagaccagttttgg
attattgactggaaatcaaattatctcggtaacttacccagtgcgtatcatacgcatgtg
ctatcatccgtaatggatgcacattcataccggcttcaggcgttaatctacacgattgcg
atacaccgatatatgcagtcacgagtaaaagattacgactacgaaacacatttcggcgca
actctttatctattcttaagaggtgttcggccggattggcctggtgcaggtatatctcga
ttcagaccgaccttagacgccatcaaagcctttgatgcactattttcagcaaaggatagg
catgtctaa
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