Vibrio tubiashii: IX91_04415
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Entry
IX91_04415 CDS
T03445
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vtu
Vibrio tubiashii
Pathway
vtu02020
Two-component system
vtu02040
Flagellar assembly
vtu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX91_04415
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX91_04415
09142 Cell motility
02040 Flagellar assembly
IX91_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vtu03000
]
IX91_04415
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vtu02035
]
IX91_04415
Transcription factors [BR:
vtu03000
]
Prokaryotic type
Helix-turn-helix
Other families
IX91_04415
Bacterial motility proteins [BR:
vtu02035
]
Flagellar system
Flagellar assembly proteins
Others
IX91_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
AAA_7
AAA
CUE
nSTAND3
ATPase
Motif
Other DBs
NCBI-ProteinID:
AIW13447
UniProt:
F9T4M1
LinkDB
All DBs
Position
1:931768..933234
Genome browser
AA seq
488 aa
AA seq
DB search
MQGLAKLLVIEDDAQARINLSNILEFVGEQCEAITSDQLDDLDWSRVWAGCILGSLNNNK
LPSKLSDKLSQANHIPLLIAGKHSYPVEELTNYVGELEYPLNYPQLSEALRHCKDFLGRK
GVNVLSSSRKNTLFRSLVGQSHGIKEVRHLIEQVSGTEANVLILGESGTGKEVVARNIHY
HSARRNGPFVPINCGAIPPDLLESELFGHEKGAFTGAITSRKGRFELAEGGTLFLDEIGD
MPMPMQVKLLRVLQERCFERVGGNTTIRVNVRVIAATHRNLETMINDESFREDLYYRLNV
FPIEMPALRDRKDDIPLLLQELMTRMESEGAQPICFTPRSINSLMEHEWPGNVRELANLV
ERMIILYPNSLVDVNHLPTKYRYSDIPEFQPEYNNLESVEEQERDALQDIFSEDFSLESS
DIFQEHENAPQSLPPEGVNLKEMLADLEVNMINQALEAQGGIVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttagcaaaactacttgtgattgaagatgatgcgcaagcacgaatcaatctc
agtaatattttagaatttgttggagaacagtgtgaggcgatcacttctgatcagcttgat
gacctagattggtctcgagtgtgggccggttgtattcttggttctctgaataataataaa
ttaccttccaagctgagcgataaattatcccaggctaatcatattcctttacttattgcc
ggaaagcattcttatccagttgaagagctaacaaactatgttggtgagctggagtaccca
ttaaattacccgcaattaagtgaagcgctgcgccactgtaaagacttcttaggccgtaaa
ggtgtaaatgttctttcctcttctcgtaaaaacacattgttccgtagccttgttggccaa
agccacggcattaaagaagtccgccatcttatcgagcaggtttctggaacagaagcaaat
gtgttaattctaggcgagtctggtacaggtaaagaagtcgtcgctcgtaatattcactat
cattcagctcgtcgtaatggcccatttgtgccaattaactgtggtgcaataccacctgac
ctccttgaaagtgagttgtttggtcatgaaaaaggggcgtttactggagcgattacctcg
cgtaaaggccgctttgaacttgctgaaggcggtacactgttcctagatgaaattggcgat
atgccgatgcctatgcaggttaaattgcttcgagtactgcaagaacgttgctttgaacgt
gtcggtggcaacaccaccatccgagtcaatgttcgtgttattgcagcaacgcaccgcaat
ctggaaaccatgatcaatgacgagtctttccgcgaagatctttattatcgtctcaacgtg
ttccctattgagatgcctgcactacgcgatcgcaaagatgatatcccattgctgctacaa
gagttaatgactcgcatggaatcagaaggtgctcagcctatctgttttaccccgcgctca
attaactcactgatggagcatgaatggcctggtaacgttcgcgaacttgctaaccttgta
gagcgaatgatcatcctgtacccgaacagcttagtcgatgtgaatcatctaccgaccaag
tatcgttacagcgatattcccgagtttcagcccgagtacaacaatcttgaatctgttgaa
gagcaagagcgtgatgcgctgcaagatatcttctctgaagatttcagcctagagtcgagt
gacatattccaagagcatgaaaatgcgccgcaaagtcttcctccagaaggggttaacctc
aaagagatgctggcggaccttgaagtcaatatgatcaatcaagcacttgaggcacaaggt
ggtattgttgcgcgagcagccgacatgttaggcatgcgtcgaacgactctagttgagaag
atgcgtaagtacaatctgcagcgataa
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