Vibrio tubiashii: IX91_04425
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Entry
IX91_04425 CDS
T03445
Name
(GenBank) Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vtu
Vibrio tubiashii
Pathway
vtu02020
Two-component system
vtu02040
Flagellar assembly
vtu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IX91_04425
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX91_04425
09142 Cell motility
02040 Flagellar assembly
IX91_04425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vtu02022
]
IX91_04425
02035 Bacterial motility proteins [BR:
vtu02035
]
IX91_04425
Two-component system [BR:
vtu02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
IX91_04425
Bacterial motility proteins [BR:
vtu02035
]
Flagellar system
Flagellar assembly proteins
Others
IX91_04425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
AAA_16
HTH_20
FleQ
MerR
Mg_chelatase
HTH_24
AAA_19
HTH_11
AAA_7
AAA
HTH_28
AAA_3
HTH_5
OKR_DC_1_N
Sigma70_r4_2
HTH_Crp_2
MCM
DUF2089
HTH_10
AAA_30
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
AIW13449
UniProt:
F9T4M3
LinkDB
All DBs
Position
1:934418..935818
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AA seq
466 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEADSAEDALVKLKSNSVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADEKSIKLLALADKVAKTDASVMVLGPSGSGKEVMSRYIHNASNRKDGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLSLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKLYVQEGNFREDLYYRLNVFPIAWPAL
CERKGDIEPLAQHLVERHCQKLGMPVPNVTANAINKLLSYTWPGNVRELDNVVQRALILS
ESGQIDSEHILLEGLDWQDASSLQVAVETGDCIVPNVKPVAEQGSNLTAGSGLGGELRDQ
EYAIILDTLEECNGRRKEMAEKLGISPRTLRYKLAKMRDAGIEIPN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtactgatcgtagaagatgatgaaggtctacgcgaagccttagtc
gacactttggctctggctggctatgaatggcttgaggcggatagcgccgaagatgcctta
gtgaagcttaagtcaaacagcgtagatattgttgtgtcagacgtacaaatggccggaatg
ggcggcttggcgttactgagaaacatcaagcagcattggccaaacctgccagtactgctc
atgacggcttatgccaacattgaagatgcggtttcagcgatgaaagatggtgccattgac
tatatggcaaagcctttcgcaccggaagtgctgctcaatatggttagccgttatgcgcct
gttaaatcggatgacaatggcgatgctgttgtagctgacgagaaaagcattaaattactg
gctctcgccgataaagtggcgaaaaccgatgccagtgtcatggttttaggtcctagcggc
tcgggtaaagaagtcatgtcgcgctacatccataacgcctcaaatcgtaaagatggcccg
tttgtcgcgatcaactgtgcggcgatcccggacaacatgctagaagcgaccttgttcggt
tatgaaaaaggggcatttactggtgcggtacaagcgtgtccaggtaaattcgaacaggcg
caaggcgggactatcttgttggatgagatcagtgagatggatctgagcctgcaagctaag
ctattgcgtgtgctccaagagcgcgaagtcgaacgcttaggcagccgtaagagcatcaag
cttgatgtccgtgttttggcgaccagtaaccgtgacttgaagctgtatgttcaagagggc
aacttccgtgaagacttgtactaccgcttaaatgttttcccaatcgcgtggcctgctctt
tgtgagcgcaaaggtgacatcgaaccactggctcagcacttagttgaacgccactgtcaa
aaactgggtatgccggtgccgaacgtgacagcaaatgctatcaacaaacttctgtcttac
acatggccgggtaatgttcgtgaattggataacgttgtccaacgcgcgcttatcttgagt
gaaagcggtcagattgattcggagcacatcctacttgaagggctagattggcaagacgca
tctagcttacaagtagcggtagagacaggtgactgtattgttcctaacgttaagcctgta
gctgaacaaggcagcaacctcactgcgggtagtgggttaggtggtgaactgcgcgatcaa
gagtacgccattattctcgacacactggaagagtgtaacggtcgacgcaaagaaatggct
gagaagctaggcattagcccgcgtactctgcgctataaattagcaaaaatgcgtgacgct
gggattgaaattccaaactaa
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