Vibrio tubiashii: IX91_10910
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Entry
IX91_10910 CDS
T03445
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vtu
Vibrio tubiashii
Pathway
vtu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IX91_10910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vtu03400
]
IX91_10910
DNA repair and recombination proteins [BR:
vtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IX91_10910
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IX91_10910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIW14706
UniProt:
F9TCH7
LinkDB
All DBs
Position
1:complement(2372698..2374728)
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AA seq
676 aa
AA seq
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MSKVFDLVSDYKPSGDQPTAIEQLLDGLDSGLAHQTLLGVTGSGKTFTLANVIASAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEIDCISVFDPLTGAVKQRDLA
RYTIYPKTHYVTPRERILSAIEKIKVELEGRKKHLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRSEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPMKFEEFESISPQTIFVSATPGNYELEKSDGEIADQVVRPTGLL
DPQLEVRPVATQVDDLLSEIRIRAAKDERVLVTTLTKRMAEDLTEYLTEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVAGKAILYADSITKSMDKAMGETNRRREKQQAYNEKMGIEPQALKRNVKDIMEL
GDITKSKKQRVSKTVPLSKVAEPSQSYDVMTPQQLDKEISKLEAQMYQHAQDLEFELAAQ
KRDEIDKLRKQFIVNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtttttgatttagtgtctgattataagccctctggcgatcagcctaccgcg
attgagcaactgcttgatggtcttgattcaggtttagcccaccaaactttacttggcgta
actggttcaggaaaaacttttacacttgccaacgtaattgccagcgctcagcgtccagct
attctacttgctccgaataaaacgctagcggctcagctttatggtgagatgaaatctttc
ttccctaataatgccgttgaatactttgtttcttactacgattactaccagcctgaagct
tatgtgcccacgactgatacctttattgagaaagatgcctccgttaacgcgcatattgag
cagatgcgtctctctgcgaccaaagccctgttagaacgtaaagatgcgattattgtcgct
tctgtgtcggcgatttatggtttgggtgatcctgaatcttatctgcaaatgatgctacat
atccgccgtggtgatgtgatggatcagcgcgatattctgcgccgcctagctgagctgcaa
tatagccgtaatgacgtcgcattcgagcgtggtcagttccgcgtgcgtggcgaagtgatt
gatatttttccggctgaatccgatcaagacgcagtgcgtatcgagatgttcgatgatgag
attgattgtattagtgtgtttgatccgctgacaggagcagtcaaacagcgtgacttggca
cgttacacgatttatcccaaaacccactatgtcacgccaagagagcgaattctttctgcg
atagagaaaattaaagtggagcttgaagggcgcaagaaacacttacttgataacaacaaa
ctacttgaagagcagcgtatttcgcagcgtactcagtttgatattgagatgatgaacgag
ctgggattttgttcaggtatcgaaaactactcacgttatctaagtggccgtagcgagggc
gagccgccaccaaccttgtttgattacttgcctcacgatggtttgctgatcattgatgaa
tcccacgttaccgtgcctcagattggtgccatgtacaaaggtgaccgctcgcgtaaagag
acgctggtggagtttggtttccgtctaccttccgcactcgacaatcgaccaatgaagttt
gaagagtttgaatccatttcgcctcagacaatatttgtctctgcaacgccaggaaactat
gagctagagaagtcggatggtgaaattgcggatcaagttgttcgtcctacaggcttgctc
gaccctcaacttgaagtgcgcccagtggcaactcaggtggatgatctgctgtcagaaatt
cgtatccgcgctgctaaagatgagcgagttctggtgactactttaactaagaggatggcg
gaagacttaaccgagtatctcactgagcacgatgttaaggttcgctatcttcactctgat
attgatacggtcgaaagggtcgaaatcattcgcgacttgcgtcttggagagtttgatgtg
ttggtgggaatcaacttactccgtgaaggcttagatatgccagaagtctccttagtggcg
attttggatgctgataaagaaggtttcttgcgttcagagcgatcgcttatccagacgatt
ggccgtgcagcacgtaatgtggcgggtaaagcgattctttacgctgacagcattactaaa
tcaatggacaaagcgatgggagagaccaaccgtcgtcgtgaaaaacagcaagcttacaac
gagaagatgggcatcgagcctcaagcactaaaacgtaatgttaaagacattatggagcta
ggtgacattaccaagagtaagaagcagcgcgttagcaagactgtaccattgtctaaagtg
gctgagccttcgcagagctatgatgtgatgacgcctcaacaacttgataaagagattagc
aaactagaagcgcagatgtatcaacatgcccaagacttagagtttgaacttgcagcgcag
aagagggatgagatagataagcttcgcaagcagtttattgttaacagctaa
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