Vibrio tubiashii: IX91_12180
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Entry
IX91_12180 CDS
T03445
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vtu
Vibrio tubiashii
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vtu03400
]
IX91_12180
DNA repair and recombination proteins [BR:
vtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IX91_12180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
SLFN-g3_helicase
GvpD_P-loop
AAA
Rad51
RecA_N
AAA_22
AAA_16
AAA_14
nSTAND3
nSTAND_NTPase5
AAA_24
NTPase_1
ABC_tran
AAA_5
Zn_ribbon_Thio2
Zeta_toxin
AAA_29
Viral_helicase1
DAP3
Zn_ribbon_8
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AIW14931
UniProt:
F9T5Y6
LinkDB
All DBs
Position
1:complement(2615955..2617334)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTISEVRLAASPTVARNERLAGYAGTSTEA
KVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCYLAS
QMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETNVDRICQIAEKEQPKIMVIDSIQV
MHVSDVQSSPGSVAQVREAATALTRYAKQNNVSVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcgaagagagcatacgtttgtaatgactgcggcgcagattttccccgttgg
caaggacagtgtaatgcgtgtggagcgtggaataccatcagtgaggttcgtttagcggca
tcaccgacagtagcgcgcaacgagcgtcttgcaggttatgcagggacaagtacagaagcg
aaggttcaaacgctttctgagattgatctgcaagaggttccgcgttttacgagtggattc
aaagagctcgaccgagtgctaggcggaggtgtggttcccggtgctgcgattctcatcggt
ggtaaccccggcgcaggtaaatcgacactcttgctacaaaccatgtgctacttggcatcg
caaatgccaacgctttatgtcacgggtgaggaatctcttcagcaggttgcaatgcgcgcc
tctcgacttggcttacccaaagacaatttgaagatgttgtcagaaaccaatgttgatcgt
atctgtcaaattgctgaaaaagaacagcctaagattatggtgattgactcgattcaggtt
atgcacgtctcagacgttcaatcttcaccgggcagtgtggctcaagtaagggaagcggca
acggctctgactcgttatgccaagcaaaataacgtctcggtgtttattgttggtcacgta
actaaagatggcaccttggctggccctaaggtacttgaacacattattgactgttctgtg
ttgctagacggtggtacagacagccgttttcgtacccttcgcagccataaaaaccgtttc
ggcgcagtaaatgaactgggcgtatttgcaatgactggccaaggactcaaagaggtcagc
aacccttcggctattttcttatcgcgcggcgaggaagaaacttccggcagctcggttatg
gtggtgtgggaaggtacgcgcccattgttagtagagatccaagccttagttgattattcg
caattggctaacccgcgccgagtcgcggttggtctagagcaaaaccgattgtcgttattg
cttgccgtactgcacaaacatggcggtctgcaaatggctgatcaagacgtatttgttaat
gtcgtcggtggggtaaaagtaacagaaaccagtgctgacctagccttagtgatggcgcta
ctatcaagctttagagatagaccactacctaaagatgtagttgtgtttggagaagttggt
ctagcaggagagattcgccctgtaccaagtggacaagagcgtttaaacgaagccttcaag
catggttttaaaaaggcaatagttcctgccgctaacatgccaaaaggcggtatcccaggt
atgcagatccacggcgtgaaaaagctctcagaggcgattgaagcatttgatgagttatag
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