Vibrio tubiashii: IX91_12360
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Entry
IX91_12360 CDS
T03445
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu00470
D-Amino acid metabolism
vtu00550
Peptidoglycan biosynthesis
vtu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IX91_12360 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IX91_12360 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vtu01011
]
IX91_12360 (murD)
Enzymes [BR:
vtu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IX91_12360 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vtu01011
]
Precursor biosynthesis
Amino acid ligase
IX91_12360 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_9
DAO
NAD_binding_8
HcgC
zf_ZIC
Motif
Other DBs
NCBI-ProteinID:
AIW14963
UniProt:
F9T621
LinkDB
All DBs
Position
1:complement(2656382..2657704)
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AA seq
440 aa
AA seq
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MTIDRWQGIEKVVVVGLGITGLSVVKHLQELPKTLDIRVIDTRDNPPGRDSLPEGVELHS
GGWNQAWLMAADLVVTNPGIALALPEIEQVINAKILVVGDIELFAWQVNKPVIAITGSNG
KSTVTDWTGQVAQATGLKVGVGGNIGVPALDLLRQDADLYVLELSSFQLETTSSLAPRAA
AFLNLSEDHMDRYQGMEDYRQAKLRIFNHASACIVNADDRATYPEQASNLVEFSLNQATR
FSLLEHEKTEYLAIDGKPICASSDLSLVGRHNVANALVVLALLTEAGVDVAKGLSALKSY
NGLTHRCQVVADNQGVKWVNDSKATNVASTMAALAGLELEGKLYLLVGGVGKGADFSELA
PILKSLNVQLCCFGEDGEQFMPLHSSAKRFDTMHEIIKWVATQVSSGDMVLLSPACASFD
QFNNFMARGDAFTELAKAYA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgaccgctggcaaggtattgagaaagtggtggttgtagggctcggtattacc
gggctctctgtcgttaaacacttgcaagaattacctaaaacacttgatattcgagttatc
gatacccgagataatcctccgggcagagactctctgcctgaaggtgttgaactgcactca
gggggctggaatcaagcgtggttgatggccgcagatttggtagtgactaatccaggtata
gcgcttgcgctgccagagattgagcaagtcattaatgccaagattctcgtcgttggtgat
atcgaactgtttgcttggcaagtcaacaagccagtcattgcgattactggatcaaacggt
aaaagcactgtgactgactggactggtcaagttgctcaagcgactggtttaaaggttgga
gttggcggcaatattggtgtgcctgctttagatttgctaaggcaagacgctgacctttat
gtattggagctttcgagcttccaacttgaaaccacctcatctctcgctccgagagcggcg
gctttccttaatctttccgaagaccacatggatcgctaccaagggatggaggattaccgt
caagctaagctgcgtattttcaatcatgctagtgcttgtattgtgaatgctgatgaccga
gctacctatcctgagcaggccagtaatttagtcgagtttagtcttaaccaagcgacgcgc
ttctcactcctagaacacgaaaagacagaatatctagccatcgatggcaagcctatttgt
gccagtagtgatctttccttagttggtcgacataacgtcgccaatgctttagtcgtttta
gctctgctgaccgaagctggagttgatgtggcgaaagggctatccgcacttaagtcttac
aacggtttgacacacagatgccaggttgttgccgataatcaaggtgttaagtgggtcaat
gattctaaggcgaccaatgttgctagcacaatggcagcgttagcaggattagagcttgaa
ggtaaactctacttgttagttggtggtgtcggtaaaggtgctgatttctctgaacttgcc
ccgattttaaagtcgctcaacgtacagctgtgctgctttggtgaagatggcgaacagttt
atgccgctacacagtagtgcgaaacgttttgataccatgcacgaaatcatcaaatgggtt
gccactcaagtttcatccggtgatatggtgctattatcacctgcttgtgcgagctttgat
cagtttaataattttatggctcgcggcgatgcctttaccgagcttgcaaaagcttacgct
taa
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