Vibrio tubiashii: IX91_12565
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Entry
IX91_12565 CDS
T03445
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vtu
Vibrio tubiashii
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vtu03016
]
IX91_12565 (truB)
Enzymes [BR:
vtu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IX91_12565 (truB)
Transfer RNA biogenesis [BR:
vtu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IX91_12565 (truB)
Prokaryotic type
IX91_12565 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIW15002
UniProt:
F9T661
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All DBs
Position
1:complement(2707222..2708169)
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AA seq
315 aa
AA seq
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MARRRKGRPINGVVLLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVDVSLDKLEACIDKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRDEIAPKELLDPLL
LPMDTAVEDLPEVNLNAELTNLVQHGMPVQVFGAPEGTPLRMTSGEEKLFIGVAEVNDDG
KVAPKRLVVFREEAE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgtccaattaatggtgttgtccttttagacaagccaaca
ggcatttcatctaatgatgcactgcagaaagtaaaacgcatttactttgcagagaaagca
ggtcataccggtgctctggatcccctagcgacaggtatgctgccaatctgtcttggtgaa
gccaccaagttttctcagttcttgttggattctgataaacgctaccgagtgatcgccaag
ttaggtgaacgcacggatacttcggattctgatggtgaagtggttgagactcgcccggta
gacgtttctctcgacaagcttgaagcctgcattgataagttccgtggtgaatctgatcaa
gtgccttcgatgttttcggcattgaaataccaaggtaagcctttgtatgagtatgcacga
aaaggtattgaagtgccgcgtgaatcacgcaaaattacggtttatgaaatcgtcctgcat
cgctttgaaggtgatgaagtcgagatggaagtccattgttctaaaggcacttacatccgc
actatcgttgatgatcttggtgagatgctaggctgtggtgctcatgttactatgcttcgt
cgtactggggttgctaaatatccatacgagaaaatggtgactctagagcaacttaacgag
ctgttagagcaagcacatcgtgatgaaatcgcaccaaaagagctacttgatccgctgttg
ttaccaatggataccgcggtagaagatttaccagaagtaaatcttaatgctgaactgacc
aacttggttcaacacggcatgccagtacaagtgtttggtgcaccagaaggcacaccgctg
cgtatgacttccggtgaagagaagctgttcattggtgttgctgaagtgaatgatgatggc
aaggtggcaccaaagcgcctagttgtcttccgcgaagaagctgagtaa
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