Vibrio tubiashii: IX91_14835
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Entry
IX91_14835 CDS
T03445
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vtu
Vibrio tubiashii
Pathway
vtu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX91_14835 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vtu03021
]
IX91_14835 (rho)
03019 Messenger RNA biogenesis [BR:
vtu03019
]
IX91_14835 (rho)
Transcription machinery [BR:
vtu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
IX91_14835 (rho)
Messenger RNA biogenesis [BR:
vtu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IX91_14835 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIW15387
UniProt:
F9T779
LinkDB
All DBs
Position
1:complement(3167578..3168837)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNRPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKDGERYFALLKVNTVN
DDKPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPECELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTILATALVDTGSKMDEVIYEEFKGTGNMEIHLNRKIAEKRVFPAIDF
NRSGTRREELLTKNEELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaacagaactgaagaacagacctgtgtctgatcttgttaaacttggcgaaagc
ttgggccttgaaaacctagctcgtctaagaaagcaagacattatcttcgccatcctaaaa
gctcacgcgaaaagcggcgaagacatttttggcgacggggttctggaaatacttcaagac
ggttttggcttcttgcgcagtgcagacagctcttacttggcaggcccagatgacatctat
gtatctccaagtcagatccgccgcttcaaccttcgtacaggtgactcgattgccggtaag
attcgtccaccaaaagacggtgagcgatactttgctctactaaaagtcaatacagttaac
gatgacaaaccagacaatgcgcgtaacaagattctatttgaaaacttgacgccactgcac
gcgaacgagcgtatggtgatggagcgtggtaacggttcgacagaagatatcacagcacgt
gttctagacttagcttcaccaattggtaaaggccagcgtggtctgatcgttgctccacct
aaagcgggtaaaacaatgctgctgcaaaacattgcacagagcattgcttacaaccaccct
gagtgtgagctaatggtacttcttatcgatgaacgtccagaagaagtaaccgagatgcaa
cgcctagttaaaggtgaagtggttgcgtctacgtttgatgagcctgcatctcgccacgta
caagttgctgagatggttatcgagaaagcaaaacgtcttgttgaacacaagaaagacgta
gtcatcctgcttgattctatcactcgtctagctcgtgcatacaacacagttgttccatca
tcaggtaaagttctgactggtggtgtcgatgctaacgctctacaccgtcctaagcgcttc
ttcggtgctgcacgtaatgtagaagaaggtggtagcctgacaattctagcaacagcgcta
gtagatactggttctaagatggatgaagttatctacgaagagtttaaaggtacaggtaac
atggaaattcacctgaaccgtaagatcgccgagaagcgtgtcttccctgcaatcgacttc
aaccgttcaggtactcgtcgtgaagagcttctaactaagaatgaagagctacagaagatg
tggattctacgtaagattgttcatccaatgggtgagatcgacgcgatggagttcctaatc
gacaagctagcaatgacgaagactaacgatgagttctttgacgcgatgcgtcgccaatag
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