Vibrio tubiashii: IX91_14865
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Entry
IX91_14865 CDS
T03445
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IX91_14865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vtu03019
]
IX91_14865
03400 DNA repair and recombination proteins [BR:
vtu03400
]
IX91_14865
Enzymes [BR:
vtu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IX91_14865
Messenger RNA biogenesis [BR:
vtu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IX91_14865
DNA repair and recombination proteins [BR:
vtu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IX91_14865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
AIW15393
UniProt:
F9T747
LinkDB
All DBs
Position
1:complement(3173544..3175382)
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AA seq
612 aa
AA seq
DB search
MTSTLLALSPSADLPTPQRILEDVFGYQSFRDGQQEVIESAVAGQDSLVIMPTGGGKSLC
YQIPALAREGLTLVVSPLISLMKDQVDQLKANGVAAECVNSTMPREELISVYNRMHSGAL
KLVYVSPERVLMRDFIERLENISLSMIAVDEAHCISQWGHDFRPEYASLGQLKQHFPHIP
VMALTATADDATRKDIMQRLQLDEPHTYLGSFDRPNIRYTLVEKHKPVSQVVRFLEGQRG
SCGIIYCGSRKKVEMVTEKLCNNGLRAASYHAGLEADERAYVQEAFQRDDIQIVVATVAF
GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADISWLRRMLDEKD
DGPQKQVEAHKLNAMSAFAEAQTCRRQVLLNYFGEYREKPCGNCDICLDPPKHFDATEQA
QKALSCVYRVNQSFGMGYVVEVLRGMQNIRVRENGHDKLSTYGLGRENSHDYWVSVFRQL
IHKGLLFQNITRNSTLQLTEEARPLLRGEMSLELAVPRLDTAARAAKSDKLSSKNYDKKL
FAKLRKLRKSIADEDGLPPYVVFSDATLIDMAEILPTSYGEMLAVNGVGQRKLEKYADPF
LDLIQEHLTNHG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacacttttagccctgtcaccttcagccgatttgccgacgccgcaacgcatc
ttagaagatgtttttggttatcagagctttcgtgatggtcagcaagaagtgattgagtcg
gctgtcgctgggcaagatagcctagtgatcatgccaacgggtggcggtaaatctttgtgt
tatcagatccctgccttagcacgtgaggggctaactttagttgtctcaccgctgatctca
ttgatgaaagatcaagtagaccaactgaaagcgaatggtgtggccgctgagtgtgtcaac
tccaccatgccacgagaagagctgatctccgtctataatcgcatgcattctggcgcgtta
aagttggtttatgtttctccagaacgagtactgatgcgcgattttattgagcgtctggaa
aacatctcattgtcgatgatagcggttgatgaagcgcattgtatttctcagtgggggcat
gatttcagacctgaatatgcctcgttaggtcagctcaaacagcattttcctcatatccct
gtcatggcgctgacggcaaccgcagatgacgcgacgcgcaaagatattatgcagcgcctg
caactcgacgagccgcatacttatcttggtagctttgatcgccctaatattcgttacacc
ctagtcgagaaacataagccagtttctcaggtagttcgctttcttgaaggccaacgtggc
agttgcggcattatctattgtggtagccgcaagaaagtagagatggtaaccgaaaagctg
tgtaacaacggcttacgtgctgcaagctaccacgcaggtcttgaagcggatgagcgtgct
tacgttcaagaggcgtttcagcgtgatgatatccagatcgttgttgccactgtcgctttt
ggcatggggatcaacaaacccaacgttcgctttgtggtgcactttgatattccgcgcaat
attgaatcctattatcaggagacaggtcgagccgggcgagatggattgcctgccgaagcg
atgatgctttacgaccctgccgatatcagttggttgcgccgtatgttggatgaaaaagac
gacggtccgcagaagcaagttgaagcgcacaagctaaacgcaatgagtgcttttgctgaa
gcgcaaacctgtcgtcgccaagtgctgcttaactattttggtgagtaccgtgagaagcca
tgtggcaactgcgatatctgcctcgatccacctaagcactttgatgccactgagcaagca
caaaaagcactctcttgtgtgtatcgtgtcaatcaaagctttggtatgggttacgtggtc
gaagtattgcgtggtatgcaaaacatccgagtgcgtgaaaatggtcatgacaagctgtcg
acttatgggctagggcgtgaaaatagccatgactattgggtcagtgtttttcgtcagttg
attcataaaggtttgttgttccaaaacatcactcgcaactccaccttgcaactgactgaa
gaagcaagaccgcttttacgtggtgaaatgtcgttagaacttgctgttccacgccttgat
accgctgctcgcgctgctaaatcagacaagctttcgagtaaaaactacgataagaagcta
tttgctaaattgcgtaagcttcgcaaatccattgcggatgaagatggcctaccaccatac
gtagtgttcagtgatgcgacattaattgatatggcagagatactaccgacctcttacggt
gaaatgcttgccgtcaacggagtggggcagcgcaagttagaaaagtacgccgacccattc
ttagatcttattcaggagcacttaacaaatcatggctga
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