Vibrio tubiashii: IX91_15080
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Entry
IX91_15080 CDS
T03445
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu03030
DNA replication
vtu03410
Base excision repair
vtu03420
Nucleotide excision repair
vtu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IX91_15080
03410 Base excision repair
IX91_15080
03420 Nucleotide excision repair
IX91_15080
03440 Homologous recombination
IX91_15080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vtu03032
]
IX91_15080
03400 DNA repair and recombination proteins [BR:
vtu03400
]
IX91_15080
Enzymes [BR:
vtu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IX91_15080
DNA replication proteins [BR:
vtu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IX91_15080
DNA repair and recombination proteins [BR:
vtu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IX91_15080
NER (nucleotide excision repair)
GGR (global genome repair) factors
IX91_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIW15429
UniProt:
F9T6Y1
LinkDB
All DBs
Position
1:complement(3219277..3222069)
Genome browser
AA seq
930 aa
AA seq
DB search
MANIPDNPLILIDGSSYLYRAFHAYPETMSNGEIPTNAVYGVVNMLRSMMRQFSSDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHNVIRAMGLPLICTPGVEADDVIGT
LAYQASQAGMPVLISTGDKDMAQLVDDNVTLINTMTNVVMDREGVVEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGINKLYDNLDDIAPLGFRGSKTMAKKLLDNE
ENARLSYELATIKLDVELEETPESLLKNEPNKDELIKLYGQLVFKSWLNELLDGGTGVVE
ADEKSGNQSNASASAAADIDTSAVTIDRSQYETILDESSFNAWLEKLKSAEVFSFDTETD
SLDYMVANLVGLSFATEEGIAAYVPVAHDYLDAPAQLERDWVLAQLKPILEDDAQAKVGQ
NLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQIAGK
GKNQLTFNQIDLDEASPYAAEDADITLRLHNRLMSNIEQDEKLKGIYQDIEVPLVPVLSR
IERTGVLIDDMKLSAQSQEIAQRLDELEQKAFEIAEQEFNMNSPKQLQAILFEKMGLPVI
KKTPSGTPSTNEEVLQELALDYPLPKLILEYRGLAKLKSTYTDKLPKMINPETGRVHTSY
HQAVTATGRLSSTDPNLQNIPIRNDEGRRIRQAFIAPHGYKIMAVDYSQIELRIMAHLSG
DKALLDAFQQGKDIHSATAAEIMGTTIDQVSTEQRRRAKAVNFGLIYGMSAFGLAKQLGI
PRGEAQDYMNKYFERYPGVMQYMEDTRSAAAELGYVETIFGRRLHLPEIKSRNGMRRKAA
ERAAINAPMQGTAADIIKKAMLLVDEWIQTEGDGRVKLLMQVHDELVFEVQESALAEIES
KVQQLMESAARLNVPLVAEAGHGDNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccaacattcctgataatccgttgattttgattgacggttcttcttatttataccgc
gcattccacgcttatccagaaacgatgagtaatggcgaaatcccaactaatgccgtttat
ggtgtggtcaacatgctgcgtagcatgatgcgtcagttctcttcagatcgtatcgcggtt
gtctttgatgcaaaaggaaaaaccttccgtgatgatatgtacccagagtacaaagctaat
cgtcctccaatgcccgatgatctgcgttgtcagatcgagcctttgcacaatgtaattcgc
gctatgggtttgccattgatctgtactccgggtgtagaagccgatgatgtgattggtacg
ctcgcttaccaagcatcccaagcgggtatgcctgtgttaatcagtaccggtgataaagat
atggctcagctggtggatgacaatgttaccttgatcaacaccatgaccaatgtggtgatg
gatcgtgaaggtgtggttgagaagtttggtatcccaccagagctgattattgattacctc
gcattaatgggcgataaggtcgataacattcctggtgtaccgggtgttggtgataaaacc
gcaacggctctgctacaaggtattggcggtattaacaaactgtatgacaacctcgacgac
attgctccactaggtttccgcggttcgaaaaccatggcgaaaaagctactcgacaacgaa
gaaaatgcacgtctgtcgtatgaacttgcgacgatcaagctagatgttgagttagaagag
acgcctgaatctctgcttaaaaatgagcctaacaaagatgagctgatcaaactgtatggt
cagttggtgtttaaatcgtggctaaacgaacttcttgatggtggtactggtgtggttgag
gctgatgagaagtcgggcaaccagagcaatgcatctgccagtgctgcggcagatatcgac
acatcggcagtgactatcgaccgtagtcagtatgaaaccatcctagatgagtcttcattc
aatgcttggctagagaagctaaaatctgctgaggtattctcctttgatactgaaaccgat
agcttggattacatggttgcaaaccttgttggcctctcgtttgcaaccgaagaaggtatt
gcagcctatgttcctgttgcccacgattacctagatgcccccgcgcagctagagcgcgat
tgggtgttggcgcaactaaaacctattttagaagatgatgctcaagcgaaggtaggtcaa
aaccttaagtacgatgcgagcgtgttagcgcgttacggcattgagatgaaaggtattaag
catgacaccatgttggcctcttacgtctataacagcgtgggtggtaaacatgatatggac
agcttggcgctgcgtttccttcagcacagctgtatttcattcgaacagattgcaggtaaa
ggcaagaaccagctaaccttcaatcaaattgaccttgatgaagcgtcaccttacgcggca
gaagatgccgatattacgctacgtcttcataaccgcttaatgagcaatattgagcaggat
gaaaagctgaaaggtatctaccaagatatcgaggttcctttagtgcctgtgctttctcgt
atcgaacgtactggtgttctaatcgatgacatgaagctgtctgcacagtctcaagagatt
gcccaacgtctggatgagttagagcagaaagcgtttgaaattgcagagcaagaattcaac
atgaattcgccaaagcagcttcaagctattctgtttgaaaagatgggtctaccagtaatc
aagaagacaccttcaggtacgccttcgactaacgaagaagtgttgcaagagctggcgttg
gattacccattacctaagctgatccttgaataccgtggtctagctaaacttaagtctacc
tacacagataaactacctaagatgattaacccagaaactgggcgtgtgcatacttcgtat
catcaagcggtaaccgcgactgggcgcctttcttcaaccgatcctaacttacagaatatt
ccaattcgcaatgatgaaggtcgacgtatccgacaggcattcatcgcgccacatggctat
aaaattatggctgtcgattactcgcagattgaactgcgtattatggcgcatttatctggt
gataaagccctgttggatgctttccagcaaggtaaagatatccactctgcgaccgccgca
gaaattatgggtacgaccattgaccaagtgagcacagagcagcgccgccgtgcgaaggca
gttaacttcggtcttatctatggtatgagtgcttttggtttggctaagcagctaggtatt
cctcgtggcgaagcgcaagactacatgaacaagtacttcgagcgttaccctggtgtgatg
cagtatatggaagatacacgcagtgcagcagcagagctgggctatgttgaaactatcttt
ggtcgtcgtttacaccttcctgaaattaagtcacgtaacggtatgcgtcgtaaagcggct
gaacgagcagcgatcaatgcgccaatgcaaggtacggcagctgacattatcaagaaggcg
atgctgttagtcgacgagtggattcaaactgaaggtgacgggcgagtgaaactgcttatg
caggttcacgatgaattggtatttgaagttcaagagtcagctttagccgaaattgaaagt
aaagtacaacaattgatggaatccgcagcacggctaaatgtccctcttgttgctgaggca
gggcatggagataactgggatcaggcgcactag
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integrated database retrieval system
