Vibrio tubiashii: IX91_17125
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Entry
IX91_17125 CDS
T03445
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu00630
Glyoxylate and dicarboxylate metabolism
vtu00680
Methane metabolism
vtu01100
Metabolic pathways
vtu01120
Microbial metabolism in diverse environments
vtu01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IX91_17125
09102 Energy metabolism
00680 Methane metabolism
IX91_17125
Enzymes [BR:
vtu01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
IX91_17125
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
NAD_binding_8
Fer4_7
Fer4_6
Fer4_9
Fer4_8
Fer4
Fer4_10
DAO
FAD_oxidored
Fer4_2
FAD_binding_2
Thi4
Fer4_16
HI0933_like
NAD_binding_7
FAD_binding_3
Fer4_21
Amino_oxidase
GIDA
Fer4_4
AlaDh_PNT_C
Fer4_3
Fer4_15
Fer4_22
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
AIW15822
UniProt:
A0A0A0SLL0
LinkDB
All DBs
Position
2:complement(359564..363775)
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AA seq
1403 aa
AA seq
DB search
MIEIVIDGKYRIVEQGSTLLEAAKVCGVDIPSLCGLNKSDQKVPCDLCVVEVESGGTQRA
CELEVYSGLNVITQSEQLSAHRKQALNRIMQDHYADCEAPCKTACPAGVDIQSYLYFIAQ
NDHQKAIEVIKKTLPMPLSIGRVCPAFCESECRRSLVDESIAIRQLKRHAADGDLAAQES
YVPEKKPAKNLSIAVVGSGPGGLTAGYYLSNEGYDVTVFESMPQAGGWLRYGIPEYRLPK
AILDKEIELMCRNGMVVKTNQKLGENFSLSQLSEDYDAVCLAVGASLAVEMNYPGSDLDG
CYLGVDYLKDYVTEQHYTTGKKVAVIGGGNTAIDCARTARRAGADTTLIYRRTREEMPAE
DYEIEEAEHEGVKFLFLTNPAENIADSNGRVSSVRLEKMALGAPDSSGRRRPQATGEFFT
EAFDTVIAAVSQKPDLSFLDNDSLSIPLTRWNTAQTDDATMHTGTGNIFSIGDFRRGPAT
AVEAVGDGRIAAKAIDLYLNGDMADMPKPEFNSRKEKKLSQVDPLHFEHIEKIARSIMPE
LTPEQREQSFAEVELGFDNDDAIQEAMRCLECGCQANTQCDLRDYSTEYGAEQQFKVSLE
VKSHQDWLTLRSKDSRHKFSVDRSSQFIEFDANRCISCGQCIQACSEQAVHGILNFIHDE
KGRPALRPDDRPHFGSARNGRLLMGDSNCVQCGACVQACPTGAMVDSRDRSQGRSEQLKQ
VDTICTYCGVGCKLTMHVDEASNQIRYVKGAESPVNQGMLCVKGRFGFDFINDDSRLTTP
LIRKDGWLQPATWQEAIDLVAKKFSSIKQDFGGNALAGFSSAKTTNEDNYAFQKFIRREL
GTNNVDHCARLCHASSVTGLEASLGSGAMTNDIPSIKHSDVIFIIGSDTTSAHPIIASHI
KQAIRHHGARLIVADPKRIDMVDHAELYLAHRPGTDVMLLNGVMQQIIKNGWYDQEYIEE
RVDGFDTLLQEVMSPAYALDKVELVTGVSAEDIFAMARTIGTAKRTAVYYSMGITQHTTG
HDNVRSIANLQLLCGNIGIEGGGINPLRGQSNVQGACDMGALPNNYPGYQKVYNPMIRQK
FSIEWNAPDLPAEPGLTLTEIIDGACQRHVRGLYIMGENPVLSDPNQAHVIEGLETLDFL
VVQDIFLTETAQYADVVLPSCSFAEKSGHFTNTERRVQRVNAAVNAPGEAKEDWWIIQQI
ANAMGSDWHYQNVADITAEITRVTPQYAGLKWDNITPEGVQWPSNKNNPNGTRIMHQTQF
TRGKGQMVGVPFRYAAELPDEEFPLVLTTGRVLEQFHTGTMTRKTRGLDKLAGPRAMISV
QDAEALGISNGQRLKVSTRRGEIEIDAFVTKRIQKGVIFIPFHFVESPVNRLTTTATDPH
AKIPEFKVAAVRVEALDIAENHV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgtaatagacggaaagtatcgaattgttgagcaaggctcgacccttcta
gaagcggccaaagtgtgtggagtagacatcccctcactatgtggcctgaacaaatctgac
caaaaagtcccttgtgacttatgtgtcgtcgaagtcgaaagtggcggaacacagcgtgct
tgtgaattagaagtctattctgggttaaatgtcatcacccaatcagaacaactcagcgcc
caccgtaagcaagcactcaaccggatcatgcaagatcactacgccgattgtgaagcgcca
tgcaaaaccgcttgccctgcgggtgtcgatattcagtcttacttatatttcattgcacag
aacgatcatcaaaaagcgattgaagtaatcaagaagacactgccaatgccgctgtcaatt
gggcgtgtttgccctgcattctgtgaaagtgaatgtcgccgctcactggttgatgagtcg
atagccattcgacaacttaaacgtcatgctgctgatggtgaccttgcagcgcaagaatct
tatgtaccagagaaaaaaccagccaaaaacctttccattgcagttgtcggaagtgggccg
ggtggcctaaccgcgggctattacttgtccaatgaaggttacgatgtcacggtgttcgag
tctatgcctcaagctggcggctggcttcgatatgggatccccgaataccgactccctaaa
gcgattcttgacaaagagatcgagttaatgtgccgtaacggcatggtggtgaaaacgaat
cagaagctgggtgagaattttagcttatctcaattaagcgaagattatgacgcggtatgt
cttgctgtcggtgcatcactcgctgtcgagatgaactatccgggcagtgatttagatggc
tgctacctaggtgtggattacctcaaagattatgtcactgagcagcactacaccactggc
aaaaaggtcgcagtgattggcggaggtaacacggcgatagattgcgctcgaacagcacgt
cgagccggagcagataccaccctgatttatcgccgtactcgcgaagagatgcccgccgaa
gactacgagattgaagaagccgaacacgaaggtgtgaagttcttattcttgaccaatcct
gccgaaaatattgccgactcaaatggtcgtgtcagttcagttcggttagagaaaatggcg
ctaggtgctccagattcttcagggcgccgccgtccacaagccactggtgaattcttcact
gaagcatttgataccgtgattgccgcggtatcgcaaaaaccggatttgagctttctggat
aacgattcactctccatcccactgactcgttggaataccgcgcaaacggatgacgccacc
atgcacacggggacaggcaatatattcagtattggtgatttcagacgtggccctgctacc
gcagtagaagccgtgggagatggtcgcatcgccgcgaaagcgattgatctatacctcaat
ggcgacatggcagatatgcctaaaccagagttcaactcacgtaaagagaagaagctttct
caagttgatccgcttcatttcgaacatatcgaaaaaatcgcgcgaagcattatgcccgag
ctcactccagagcaacgtgagcagagctttgccgaagttgaactgggtttcgataacgat
gacgccattcaagaagcaatgcgctgtcttgaatgtggctgccaagccaacacccaatgc
gatctacgtgactactcaacagaatatggtgctgagcagcaattcaaagtttccctagag
gtgaaatctcatcaagattggttaacacttcgcagtaaagattctagacataagttcagc
gttgaccgtagttcgcagtttatcgagttcgatgctaaccgctgtatcagctgtggtcag
tgtattcaggcatgtagtgaacaagccgttcacggtattctcaattttattcacgatgag
aaaggacgcccagcccttcgccccgatgacagaccgcactttggctcagcgagaaatggt
cgtttgctcatgggtgactccaactgcgtgcaatgtggagcgtgtgtgcaagcctgcccg
acaggcgccatggtcgatagccgagatcgctctcaaggtcgcagcgaacaacttaaacaa
gtcgataccatttgtacttattgcggggttggctgcaagctcaccatgcatgtcgacgag
gcgagcaaccaaatccgctacgttaaaggtgcagaatctcccgttaaccaaggcatgctg
tgtgtcaaaggccgttttggcttcgactttatcaatgatgactcaaggcttaccacacca
ctcatccgcaaagatggttggttacaacctgcaacgtggcaagaagcgatcgatttagtc
gcgaagaagttctcttcgattaagcaagacttcggcggcaatgcgttagcaggtttttcg
tcagcaaaaaccaccaacgaagataactatgcattccagaaatttattcgtcgtgaactt
ggcactaacaacgtcgaccactgcgcgcgcttgtgtcatgcctctagcgttaccggtctt
gaagcctcgttaggcagtggtgcaatgaccaacgacatacccagcatcaaacattcggat
gttatctttatcattggctcagacaccacgtctgcgcacccgattatcgcttcgcatatc
aagcaggcaattcgtcatcatggcgctcgactgatcgtcgccgatccaaaacggattgat
atggtcgaccatgctgagctgtacctcgctcatagaccggggacagatgtcatgctgtta
aacggggtgatgcagcagatcattaaaaacggttggtacgatcaagagtacatagaagag
cgtgtggatggtttcgacaccctacttcaagaagtgatgtctcctgcttacgccttagat
aaagtcgagcttgtcactggagtcagcgctgaagacatctttgcgatggcgcgcaccata
ggcaccgccaagcgtaccgctgtttattactctatgggcattacccaacatacaacgggg
cacgacaacgttcgctcaatcgccaacctgcagcttttgtgcggcaacattggtattgaa
ggtggtggcatcaacccactacgcggtcaatctaatgttcaaggggcctgtgatatgggt
gcactaccaaacaactaccctggctatcaaaaggtgtataacccaatgatacgccaaaag
ttctctattgagtggaacgcacctgacctgccagcagaacccgggttaacactcaccgag
atcattgatggcgcatgccaacgtcatgtgcgcggcttgtacattatgggtgagaaccca
gtattgagtgacccgaaccaagcccatgtaattgaagggttagaaacgctcgacttctta
gtggtgcaggacatcttcttaactgagacagcccaatacgcagatgtggttttaccttca
tgctcgtttgccgaaaaatctggtcacttcaccaatacagagcgtcgcgtgcaacgagtc
aacgccgcagtcaacgctccaggagaagcgaaagaggactggtggatcatccaacaaatc
gccaatgcaatgggcagtgactggcactaccaaaatgtcgctgacataacagcggaaatc
acccgcgtcacgccacaatatgctggcctcaagtgggataacattacgccagaaggtgtc
cagtggccgagcaataagaacaacccgaacggcacacgcatcatgcaccaaacccaattc
actcgcggtaaagggcagatggttggagttccattccgctacgcagccgaactgcctgat
gaagagttcccgctagtgcttaccacaggccgagtgttagaacagttccacaccggaacc
atgactcgtaagaccagagggctcgacaagcttgccgggccaagagccatgatcagtgta
caagacgccgaagcactggggatttcaaatggtcaaagattgaaagtctcaacccgcaga
ggagagatagagatcgatgcgtttgtaaccaaacgaatccagaaaggggtgatctttatt
cccttccacttcgtcgagtcgccagtaaacaggctcaccactacagccaccgacccacac
gctaagatcccagagtttaaggtcgcagctgtaagagttgaggcactagacatcgcagaa
aaccacgtctaa
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