Vibrio tubiashii: IX91_19960
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Entry
IX91_19960 CDS
T03445
Name
(GenBank) diguanylate cyclase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vtu
Vibrio tubiashii
Pathway
vtu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vtu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IX91_19960
Enzymes [BR:
vtu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IX91_19960
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AIW16369
UniProt:
F9T2M5
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All DBs
Position
2:981159..983081
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AA seq
640 aa
AA seq
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MSKLNTGTITIPEDMSDNWQTIVNLLAEIVNVPAALIMRIHKEHIEVFSANNNRTHPYHI
SDSETLGQGLYCETVVNENRQLVVPNASADEKWCNNPDMKFGLLAYCGLPVRWPNGDMFG
TICVLDDRENPFGDTYQQLLISFRDSVEAQLKTLYQNHYLQQLNLELESRVSTRTQDLVD
LNYSLNLEIDKRRAAERKIRYQQLHDLGTGFLNRNALESETQQLLDILPLEAHLDDHFKI
GLLHIGFTNGRRIQAKYGYGAWEDVLKEFRQRLTQHTQLNVVTARPSSTDLAFVFKTHQY
ENDISTLCRELVDVSQTEFVVEGEHLHLHSYIGVASSDDTQSAKSLLKYAAEAMQSCKDS
GHKFSFYSQDISDTQKNISQLESYLLQAVRNEDLLLYFQPKVSPLTHRWIGAEALLRWRH
PILGDISNETLIHLAEQNGLIFEVGSFVLRSAIQKAAEWATHVNDFVISVNVSAVQLQSP
QFVNQVQDLLVAYQLPARYLELEVTESGLIADEIVARNTLISLSELGVTLSLDDFGTGYA
SFNYLKKFPFDAIKVDKSFVHQLSHSDDDKEIVRSIISIAKKLNLKVTVEGIENSEHESF
ILAEGCDIGQGFLYGKPMPFDEFEMHLLNQNNLSPKYSYS
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagttgaatacagggacgattactattcctgaagacatgagtgacaattggcaa
acaatcgtcaatctactcgcagagatagttaacgttcctgcagcattgattatgagaata
cataaagagcatattgaagtattctctgccaacaataaccgtacgcacccttaccatatc
agtgatagtgaaactctaggacagggtttgtactgtgaaactgtcgtgaatgaaaataga
cagcttgttgtgccaaacgctagtgcggatgaaaaatggtgcaataacccagatatgaaa
tttggactgctcgcttattgcggcttacctgtacgttggccaaatggtgatatgtttggc
acaatttgcgtcctcgacgatcgagaaaacccttttggtgatacctaccaacaactgctg
atttcatttcgagactctgtagaggctcagcttaaaaccctttatcaaaatcactatttg
cagcagcttaacctagagcttgaatcaagagtcagtactcgtactcaagatctggttgat
ctcaattattctctcaacttagaaatcgataaacgccgcgctgctgagcgtaaaatccgt
tatcaacaactgcatgatctcgggacaggttttttaaaccgaaacgctttggaatcagaa
acacagcaacttctcgatatcttgcctttagaagcccatctagatgaccattttaaaatt
ggccttttacacataggctttacaaatggaagaagaattcaagccaagtacggttatggc
gcttgggaagatgtccttaaggaatttcgtcaacgtctcactcaacacacgcagttaaac
gtcgtcacagcccgaccatcatcaacagatttagcatttgttttcaaaacgcaccaatac
gaaaatgatatcagcaccttgtgccgcgaattagttgacgttagccagactgaatttgta
gtcgaaggcgaacatctgcacctccatagctatattggtgtcgcgagttcagatgacacc
cagtcagcaaaatcgttacttaagtacgcagcagaagcgatgcagtcatgtaaagactca
gggcataagttcagcttctattctcaagacatttcagatacgcaaaaaaacatcagccaa
ctagagagctacttactccaagctgtgcgtaatgaagacttattgctctatttccaaccc
aaagtatctccacttacccatcgttggattggtgcagaagccctactccgttggcgtcat
cctatacttggcgatatttctaatgaaacactgatccacctggccgaacagaacggatta
attttcgaggtcggaagctttgtccttcgctctgcaatacagaaagcggctgaatgggcc
acacatgtcaacgattttgttatcagtgtcaatgtttcagcagtgcaacttcagagccca
caatttgtcaatcaggtgcaagacttgttagttgcttaccaattacctgcgcgctactta
gagctagaggtgacagaaagcggcttgatagcagacgagattgttgcgcgtaacacgctg
atttctctaagcgaacttggcgtgacattgtcacttgacgactttggtacaggctatgct
tcgtttaactatctgaagaagtttccatttgatgccatcaaggtcgacaaaagtttcgtt
catcagttatctcatagtgatgatgacaaggaaattgtccgctctattatttcaattgcc
aaaaagcttaaccttaaagtcacggttgaaggcatcgaaaacagcgaacatgaatccttt
atactggctgaaggttgtgacatcggtcagggcttcctctacggtaaacccatgccattt
gatgagtttgagatgcatctgttaaaccagaacaacttatctcctaagtactcatattct
tag
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