Vigna umbellata (ricebean): 124819839
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Entry
124819839 CDS
T09662
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
vum03440
Homologous recombination
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124819839
03420 Nucleotide excision repair
124819839
03430 Mismatch repair
124819839
03440 Homologous recombination
124819839
03460 Fanconi anemia pathway
124819839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124819839
03032 DNA replication proteins [BR:
vum03032
]
124819839
03400 DNA repair and recombination proteins [BR:
vum03400
]
124819839
Transcription factors [BR:
vum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124819839
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124819839
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124819839
MMR (mismatch excision repair)
124819839
DSBR (double strand breaks repair)
HR (homologous recombination)
124819839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RMI1_C
zf-like
Motif
Other DBs
NCBI-GeneID:
124819839
NCBI-ProteinID:
XP_047147385
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MLTCFERNGGGGRSGMRGPNFGHICLYLTWQLSYWKLMDKVILSVLSLPFAEISINMILK
XAIPAIINGDVDAKPLVQVLDVTLVSNSNNSQQQRYRLLISDAVSSHHAMLATQLNDRIR
TGRVRKGSVVQLLDYICTPFKNRKIIMVLNMETIIADFEIIGNPKPPLDSDLPSVRAIAD
NTVESLARSNNTSNTISNSAAQNASHDKAQNFRPTIQPPYQPPPVYKGRGAVMKNEAPAR
IIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVV
DRFYSVIEVGKVYMISKGSLKPAQKNFKHLKNEWEIFLESTSTVELCPDEDDSIPRQQFS
FRPISDIENVDNNSILDVIGVVTSVNPSVPILRKNGMETQRRVLSLKDTSGKSVELTLWG
EFCNREGQQLQEMVDSGFFPILAVKAGKVNDFSGKSIGSISTTQLFINPEFPEANSLRQW
FDLVGKDSASLSISRDVIPGGTKNEVRKTVSQIKDEGLGRSDKPDWITIRATIAFIKTDT
FCYTACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEECDYRYLLQAQILDGTGLTWVTA
FQEAGEEIMEYSAKDLYLLKHEQQDDERFAEVLKSRLFKQFMFRLKIKEELYGDEQKVKI
TVVKVDKVNYSSESQYMLDSISKFCRK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgtgctttgagagaaatggtggtggaggcagaagtggaatgagaggtccaaat
tttgggcatatttgcctctatctgacgtggcagctttcctattggaaattgatggataag
gttatcttatctgtcctatcattaccctttgctgaaatatcaattaatatgattttaaag
tncgcgattccggcgataattaatggcgacgtcgacgccaaaccgcttgttcaggttttg
gacgttaccttagtctccaacagcaacaactcgcagcagcagagataccgtctcctgatt
tccgacgccgtttcgtctcaccacgcgatgctcgccactcagctcaacgaccgaatccgg
accggtcgagttcggaagggttcggttgttcagcttctcgattatatatgcactcctttc
aagaaccgcaagattattatggttctaaacatggaaactataatagctgattttgaaatc
attgggaatccgaagccacccttggattcagatttaccaagtgtgagggctatagcagat
aacactgtggagagtttggccaggagtaataatactagtaatactattagtaactctgct
gctcaaaatgcaagtcatgataaagcccagaatttcaggccaacaattcaacctccatac
caaccgcctcctgtttacaaaggccgtggtgcagttatgaaaaatgaggcgccagcacgc
atcattcctatagctgctttaaatccttatcaaggtcggtgggctatcaaggcaagggta
actgctaaaggtgatctgcgccgctacaataatgcacgtggtgatgggaaagtcttctca
tttgatctcctggattctgatggaggtgaaatacgagtaacatgctttaatgctgttgtt
gatcgattctatagtgtaattgaggttggtaaagtttacatgatatcgaaaggtagctta
aaacctgcacagaagaatttcaaacatttgaagaatgaatgggaaatttttttggaatca
acttcaacagtagagttgtgcccggatgaagatgattctatacctagacagcagttctca
ttccgacctatcagtgacattgagaatgttgacaataactccatccttgatgttattggg
gttgtgacatctgtgaacccttctgttcccatcttgaggaagaatggaatggaaacccag
agaagagttttgagtctaaaagacacttctggcaagagtgttgaacttaccctgtgggga
gaattttgcaatagggaagggcaacagttgcaagagatggtagattctgggtttttccct
attttagctgtcaaagcggggaaggtgaatgattttagtggaaagtcgataggctctatt
tctaccacacagcttttcataaatcctgagttccctgaggccaatagcttaagacaatgg
tttgatctagttggaaaagattctgcttccctttcaatttctagggacgttattcctgga
ggaacgaagaatgaggttcgtaaaactgtatctcaaatcaaggatgaaggtctgggacga
tcagacaagccagactggataacaataagggcaaccatagcattcatcaagactgataca
ttttgttacacagcttgccctctgatgattggagatcgacaatgcaataaaaaagtgact
aggtcaggaaacacaagatggcaatgtgatagatgcaatcaagaatttgaggagtgtgat
taccgataccttctccaagctcaaattctggatggcacaggattaacttgggtaactgct
tttcaggaagcaggtgaagagattatggagtattcagcgaaagatctgtacttgttgaag
catgaacaacaggatgatgagaggtttgcagaagtactcaagagccgactcttcaaacag
tttatgtttaggctgaaaatcaaagaggaattatatggcgatgaacagaaggtcaagatt
actgtagttaaggtagataaggtgaattattcttcagagagtcaatacatgcttgattcg
atttccaagttttgtaggaagtga
DBGET
integrated database retrieval system
