Vigna umbellata (ricebean): 124819895
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Entry
124819895 CDS
T09662
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
124819895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vum04040
]
124819895
Ion channels [BR:
vum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124819895
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
TMEM95
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124819895
NCBI-ProteinID:
XP_047147453
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MIILFIFLKLAESTNMANFEKTGEPSPSETHAKHNEHSRSGKVVSRTRSASVSIPVISME
SYEREISLVGHTGRLPSVRIPSLMHMSGPLYVPNGTENPLKHTIVVEGNKVVESKTEKFC
NLSEKDENHCNNNYDTKNEHLVRSRLLGTCNDPYCTTCPTYFKTSMQRLPNDSTVFDPQF
HFHSALYGDAKGFGGKVLSFCSSCVPGVMNPHSKVVQQWNKLLAIFCMGAIFVDPLFLFL
IYVQKDDKCIAIDWDTRKILVFLRTVNDTVYFLNILLQFRLAYVSPESRVVGAGDLVDHP
KKIALHYLKGYFLFDLFVVFPLPQIMMFFVLPTRLGASGANYAKNLLRAAILVQYIPRLF
RILPLLIGQSETGFIFESAWANFIINLLIFMLASHIVGSCWYLFGLQRVNQCLRDVCGKS
RIDRCTTIIDCGRRGYIRNNYSDQASALWNNNTDAIACLNSSPGGFQYGIYVNVVPLTTE
TSLINKYIYSLFWGFQQISTLAGSLTPSRFWGEVLFTMAIIGLGLLLFAVLIGNIHNFLQ
GLGRRRLEMQLRGRDVEQWMRHRRLPEDLRKKVRSAERYNWAATKGVNEEMILENLPEDL
QRDIRRHLFKFVKKVRIFTLMDEPILDAVCERLRQKTYIKGSLILTQGCLIEKMIFIVRG
KLESIGEDGVGVPLSEGDACGEELLTWYLEHSSSVSTDGKKVRLPGQRWLSNRTVKCLTN
VEAFSIRAEDLEEVTSRFMRFLRNLRVQGSLRYESPYWRSLAATRIQVAWRYWKKCRSNS
MTSQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgattattttgttcattttcttaaaacttgcagaatcaacaaacatggctaattttgaa
aaaactggggagcctagtccatccgaaacacatgcaaaacataacgaacattctaggtct
gggaaggttgtatcaaggacacgaagtgcatcagtttctattcctgtaatctccatggag
tcatatgagagagaaattagtcttgtgggtcatactggtcgacttcctagtgtaagaata
ccatccttaatgcatatgagtgggccactatatgttcccaatggaactgaaaatcctttg
aagcacactatagttgtggaaggaaacaaagtagtggagagcaagacagaaaaattttgt
aatcttagtgagaaagatgaaaatcattgcaataacaactatgatacaaagaatgaacac
ttggtgaggtctaggctactcggaacatgtaatgatccttattgtactacttgcccaact
tacttcaagacctctatgcaaagacttccaaatgattccactgtgtttgatccccagttt
cacttccacagtgctctttatggggatgccaagggttttggtggaaaagttctctctttc
tgttcttcatgtgttcctggagttatgaatcctcactcaaaagttgtacaacaatggaac
aagcttttggccattttttgcatgggagcaatttttgtggatccgttatttttgttttta
atctatgtacagaaggatgataaatgtatagctatcgactgggatacgagaaaaatactt
gtttttcttagaacagtgaatgatactgtgtatttcttgaacattcttctccagtttagg
ctggcctatgtttccccagagtcaagggtggttggtgctggagatttagttgatcatccc
aagaaaattgcacttcattaccttaagggttattttctttttgacttgtttgttgtattt
cctcttcctcagataatgatgttttttgtcctaccaacccgcttgggggcatcaggagca
aactatgcaaagaatcttctgcgtgcagcgatccttgtgcagtatattcccagattattc
aggatcctgcctctgctaattggacaatctgaaacaggatttatatttgaatcagcttgg
gcaaacttcatcataaatcttctcattttcatgcttgctagccatattgttggctcttgc
tggtatctcttcggtctacagagggttaatcaatgcttgcgagatgtctgcggaaagtct
cgtattgatagatgcacgacaatcattgattgtggaagacgaggttatatcagaaacaac
tattccgaccaagcatcagctttatggaacaataacacagacgccattgcttgtttgaat
tcctcacccggcggtttccaatatgggatctatgtcaatgttgtacctcttaccacggaa
actagtttgattaacaaatatatttattctcttttttgggggttccagcaaattagtact
ctcgctggtagtttaaccccaagcaggttttggggagaagtcctttttacaatggccatt
ataggattgggactcttgctttttgcagttctgattggaaacatacataactttcttcaa
ggtcttggaagaagaaggctagaaatgcaactcagaggccgcgatgttgagcaatggatg
aggcatcgtcgtttaccagaagatctaagaaagaaagtacgaagcgctgaacggtataat
tgggctgcaacaaaaggggtgaatgaagaaatgattcttgagaatttgcccgaagatctc
cagagagacataagacgtcatctcttcaaatttgttaagaaagtccgaattttcactctg
atggatgaacctatcttggatgccgtctgtgagagactgagacagaagacatacataaaa
ggaagtttaattttgacccaaggttgtctaattgagaagatgatctttattgtgcgcgga
aaattggagagcattggagaagacggagttggagttcccttgtctgaaggagatgcttgt
ggtgaagaacttctgacatggtatcttgaacattcttcttctgtaagcacagatggtaaa
aaagtaaggcttccagggcagaggtggcttagcaacaggacagtaaagtgcctaacaaat
gtggaggcattttcaatccgagctgaagatcttgaagaagtcacaagccggttcatgaga
ttcttgcggaatcttcgggttcaaggatctctaaggtatgaatcaccttactggcgatca
ttggcagcaactcgaattcaggtggcatggagatactggaagaaatgtagaagtaattct
atgacctcacaataa
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