Vigna umbellata (ricebean): 124819934
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Entry
124819934 CDS
T09662
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124819934
Transcription factors [BR:
vum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
124819934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124819934
NCBI-ProteinID:
XP_047147502
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MDSSMASAGGSADEGSQSHNNGRKTSYKRLSSSQTSRLERFIKDCPHPDEAQRRQLAAEI
GLEPRQIKFWFQNKRTQIKNQHERADNTALRVENDRIHTENVTMQEALKSMLCPSCGGPP
CLEGDREHAIHNMRLENMHLKEEHEKVSRLLSRYLESQMLPPDQFQQGFFPIIGSSSNAA
GLGNPLNQVIGGSSSHDPNLALHMMDGGHNLFASEGIEKNLMAKVAATAMDELVRLVRIN
EPFWIKSSSQDGKLCLLLENYQKMFLKTKHFKGPNVRIEATKESGIVNINSLQLVDMFLD
SDKWVNLFPTIVSKAETLKVIERGLPGNRSGALQLMFQQMHVLSPFVQPREFQFLRFCQQ
IEEGLVIADVSFDSFQQKPSIFQSWKHPSGCLIQELPNGCSMVTWVEHMEVDDKIQTHPL
YKDIIVKGVAYGAERWIMELQRICERFAAFYVEKIPDHDAAGGQTFSYLTQNPNTLINSL
EGRRSIMNFSHRMLKIFCESITMADGLDFPLCDLANTSGVRVSIRESKINGQPSGMIVAA
ATSIWLPLHYMKVFEFFLDDKNRAQWDVLTCGNQAHKVAHISNGIHPGNCVSVIRPFIPS
ENNALILQESFTTPMGSYVIYAPTDVATMTAAIMGENSSMLPVLPSGFVICPDGEPNSAM
AFDGADTERLGGSLLTVAFQILASADGRNMPNRKAGAAVNSLLTSTILRVRDALNCNN
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggattcttcaatggcaagtgctggtggttctgctgatgaaggttctcaaagccataac
aatggaaggaaaacctcctacaaacgtctctcttcttctcaaacatcaagacttgaaagg
ttcatcaaggattgcccacaccctgatgaggcgcaacgacgtcaattggctgctgagatt
ggtcttgagccaagacaaataaagttctggtttcagaataagaggacccagatcaagaat
caacacgagagagcagataacactgctcttcgagttgagaatgataggatacacacagaa
aatgttacaatgcaagaggccttgaagagtatgctttgcccatcttgtgggggaccaccg
tgtcttgaaggagatcgtgaacatgctatccataatatgagacttgaaaatatgcaccta
aaggaagagcatgagaaggtgtctcgtctactttcgaggtacttggagagccagatgtta
ccacctgatcagttccaacagggttttttccccatcataggatcaagttcaaatgctgca
ggacttggaaatccactgaaccaagtgatcggtggaagttcgagtcatgatccaaatctt
gctttgcatatgatggatggtggccataatttatttgcgagtgaaggcatagaaaaaaac
cttatggctaaggttgctgctaccgcaatggatgagctagttaggcttgttcggattaat
gagcccttttggattaagtcttcatctcaagatggcaagctctgtctactgcttgaaaac
tatcaaaaaatgttcctaaagaccaaacatttcaaagggccaaacgtgcgtattgaagca
acaaaagaatcaggaatagtgaacattaatagccttcagcttgttgacatgtttcttgat
tcggacaaatgggtgaatttgttcccaacaattgtctcaaaagcagaaacactgaaagta
atcgaaagaggtttgccaggaaaccgaagtggagccttgcagctgatgttccagcaaatg
catgttctttcaccctttgtgcaacctcgtgaatttcaattccttcgtttctgtcaacaa
attgaagaaggcctggtgatagcagatgtatcatttgattccttccagcaaaaaccctct
atttttcagtcttggaaacatccctctggatgcttgatccaggaactgcctaatgggtgc
tccatggttacttgggttgagcacatggaagtggatgataaaatccaaacacatccgctg
tacaaagatattattgttaagggcgttgcatacggagctgaaaggtggattatggaactt
caaagaatttgcgagagatttgctgccttttatgttgaaaagatacctgatcatgacgct
gcaggaggtcaaactttctcatatttaactcaaaaccctaacactttgatcaattctctt
gagggaaggcgaagtataatgaatttttctcatcgtatgctgaaaatcttctgtgaaagt
ataaccatggcagatggcttggactttccgctttgtgatctggcgaacactagtggggtt
agggtctctattcgcgaaagcaaaatcaatggacagccaagtggcatgattgttgcagct
gctacctccatttggcttcctctccattatatgaaagtttttgagttcttcctagatgat
aaaaaccgtgctcagtgggatgttcttacctgtggaaatcaggcacacaaggtggcacac
atctcaaatggaattcaccctgggaactgtgtatctgttattcggccattcatccctagc
gagaacaatgcactgattcttcaagagagtttcacaaccccgatgggatcgtatgttata
tatgcgccaactgatgtagcaactatgactgcggccataatgggagaaaactcttcaatg
ttaccggttcttccatcaggttttgtgatctgtccagatggagaaccaaattcagctatg
gcatttgatggtgcagatactgaaagattgggagggtcattgctgactgtggcatttcaa
atactagctagtgctgatggacgcaatatgccaaataggaaagctggagcagctgtcaac
tctcttttaacctcaactattctcagagtcagggatgctctcaactgcaacaactag
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