Vigna umbellata (ricebean): 124820153
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Entry
124820153 CDS
T09662
Name
(RefSeq) uncharacterized protein LOC124820153 isoform X1
KO
K24155
rabconnectin-3a
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124820153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124820153
Membrane trafficking [BR:
vum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124820153
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
124820153
RAVE complex
124820153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124820153
NCBI-ProteinID:
XP_047147753
LinkDB
All DBs
Position
Unknown
AA seq
2520 aa
AA seq
DB search
MASIRNTKMNPIDHLPLCLLRSDTVPPAPTLSESTVDFLPHFSGYSWIAYAASSLLVVSH
FPSPISPYQSRIGPIFRQSFQLSADPLAAVAWSPCSPSYGDLAAAADNCICLFHHNSTAA
KGSFCWSQNAVLVQHTKVANIKWTGSGDGIISVGMEVVFWKKSNKCWEVAWKFKADQPQT
LVSATWSIEGPSATAAHPSEEQIEGALTNEESKYVVVCQSNGLSEYSKVKLHHPLPVVMI
QWRPSREKLSNRYGKCSVRHVLLTCSLDGTARLWSEINNGKARRVGKDINDQKNAGSSFC
VVAVIEINQTLNGTLGSDIFVRWGAEFEGIFRTGEESKQVFSKRFEYDVRNCDWIVGFGP
GMLLSFWAVHCLDDVSPLRFPRVTLWKRHELHNHDIANVYKFNSSDFKNAIFLQKVILMR
NCLSGPPIICSTLQLLSCNSLVWSNFRILTIHDAVENSIDNANTDNISPYLTGGVLNLDG
HSGKILKVSIHPYTCKVQFAASLDSNGLLLFWSLSNISNCILGCPTLVPTMELCGKLATQ
DSCSLYTSLTWAPSILGDKLFFFMGHTRGIDCFIVNICRTEEENIECHYLCTIPFNGHGP
YEDGPLDIFTIPLNSTCDKTFCSSKLMLLAVWMGRFQALSWEVSLHSFDMLSNSCECNFD
AKSIDDCSVWAFESTFADKKYYVTVNPCSCEFPSSNDLVTSFAVANPGTVSHIQQEFGFA
NDLCSNYPTYIMVTGSSDGILKLWKSIPGNSLTQHLPWELVGVLVAHDGPIKGICFSDCG
EKIATIGHESNSNDINTIHIWDAVPLISAGTFILEDKIKTDSDVIALRWLTLGTGELLLG
VCLHNELQIYAPKHCIGTTFPNSVNFPKVNIWVRIAFAHSSIPIYDFLWGPRAAAVMIHT
NYFSIFSHWLFHMDKKQGSNFHPCDSKSNAYNCEDEIYEDVLSAVFTEHIGAFIEQTNGD
SQVDFNSVESIKKINMKDNSSSLFLAKEQLKFELLTKVGLWSILEVTEIISGSLPTYHPD
VLLINISSGNWKRAYVAVRHLVECLTSTYDPKRRHIPKRICLPNIVLSNYLEGRISKGSQ
GKGFQWGGDSASITSISQAQSSLFPFPYHSGSNAENDSIFSTKSELNGFIESLENFTDLP
LLIGVEKTQILAIIDLLSEVSSAHSSSAYQSLDEPGRRFWVVLRFRQLLFLRKFGKAASF
EELLVNSRLFVWAYHSDSLDNLFGSVIPNEPSWQEMRALGLGFWYANIPQLRARMEKLAR
AQYLKNKNPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQDEKNKAAALKN
AYVLLGRHQLELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVDGHGGPLERHLIT
KYILPSAIDKGDYWLASLLEWEMGNYYKSFHRMLEYSVHPVPPESTVMSNCGHFLDPTIG
FYCQMLATKNSMRNAIGEHNSAILLRWATLMTVASLKRSGNPLEALEYFSSSPSMPGTAN
QDSELGDSHDVLSDTLMPLPRKCSNWLSANVSMHLEFHIKLNLALCYFSKLIREHPSWLD
TFSEYNEEPSDSDEYMKYYEKSVESFKQKLYSGLALFEQRFLLAPHCLIGMILLLLCHHG
SLCIGYDMTDGYTQGELSQKKSDMLEDFNLYHSRITPLFKTAEEVSFFYSRLFCACSMES
SQQDLLIDGKPKFLDASQCCIEGVFVSLWFLKATLRIQLSSISKDLIKPLLDILDFYEYY
LLFSLAWLQKNSEVLLYMVEPFFVAQSNGRNPYDVDMVNLKKLIPKIGQLLAQTSSIPSI
QNLQLSEHDIKHSIPDDERWKILGTCLWQHMSRFMISNSNSVLAKLEDGNLSGLFRRKYA
YGESCIINMDSETISLPEKIRIVSYSLCDLLITSATHISSYHVKQHAEFLWQKVKNDSNV
KTLEWLKQKSEFSQNQNLNVLELGNRKDYSVHQLLWDHSADPKLIFDCFAQEKLNWPNDL
DHMHTKGWNDLSMIMTGLHNTDDTCGDEFNLRSSNHEVGTPVKETSLNGHPSAGSNKKDI
TSTNFAVFQSPREMYKRNGELLEALCINSTCQQEAAVASNKKGIVFFHLEDETPHSGKLN
GLLWATADWPQNGWAGSESTPTPTCVSPGVGLGSKKGAHLGLGGATVGVGSSAWPNNDLT
GAGVLGMLGYAEIGASRLGWEIQQDFEDFVDPPATLENISTRALSSHPMRPFFLVGSSNT
HIYLWEFNRDKATATYGVLPAANVPPPYALASISALKFDHFGHRFASAALDGTVCTWQLE
VGGRSNVRPTESSLCFNGHASDVTYFSSSGSIIAVAGYSSNGVNVVIWDTLAPPTTSRAS
ILCHEGGAQTVSVSDNHVGSGSVSPLIVTGGKGGDVGLHDFRYIATGKAKRHRRADNIAQ
SSASSLARDKDQNVEGMLWYIPKAHSGSVTKVVTIPNTSLFLTGSTDGDVKLWDAQSTRL
IHHWSKIHEKHTFLQPSSRGFGGVVRAAVTDIQIVSNGFLTCGGDGTVKLVRLDNHLRGN
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatccgaaacacgaagatgaaccccatcgatcaccttcccctctgtctcctc
agatccgacacggtcccacccgcccctaccttatccgaatcaaccgtcgatttcctccct
cacttctccggctactcttggatcgcttacgccgcttcttctctcctcgttgtctcccac
tttccttctcctatttccccttatcaatcccgcatcggccccattttccgccaatccttt
cagctctcagccgatcccctcgctgccgttgcctggtcaccttgttcaccctcctacggc
gaccttgccgccgctgccgataactgcatatgccttttccaccacaactccaccgctgca
aaaggttctttttgttggagccagaatgcagtgcttgtacaacatacgaaagttgcaaac
atcaaatggacaggatcaggagatggaatcatttctgttggaatggaggtggttttctgg
aaaaagagcaacaaatgttgggaggttgcttggaagtttaaagcagatcaaccccaaact
cttgtttctgcaacgtggtctattgagggcccttcagcaactgcagcacatcctagtgaa
gaacagattgaaggggccttgaccaatgaggaaagcaaatatgtggttgtatgtcaaagt
aacggactatctgaatattcaaaagtcaagctacatcatcccctacctgttgtaatgatt
caatggagaccatcaagagagaagttatcaaacagatacggtaagtgttcagtaaggcat
gtattgttgacttgcagcttagatgggactgcaaggttatggagtgaaattaataatgga
aaggccaggagagttgggaaggacatcaatgatcagaaaaatgctggttcctccttttgt
gttgttgctgttattgagattaatcagacgttaaatggaactcttggttcagatatattt
gtgagatggggggcagaattcgagggaatatttagaactggtgaagagtccaaacaagtt
ttttccaaacgatttgagtatgatgtcagaaattgtgattggatagttgggtttggtcct
ggaatgttgcttagcttttgggctgtccactgtcttgatgatgtttccccactgagattt
ccccgagttacattatggaagaggcatgaactccacaaccacgacatagcaaatgtatac
aagtttaactcatctgattttaaaaatgcaatatttcttcaaaaggttattttaatgaga
aattgcctttctggtccacctattatatgctcaacacttcagctattgtcttgtaattcc
ttagtttggtcaaatttccgtattttaacaatacatgatgctgtggagaactccattgac
aatgctaacacagataacatttccccctatttgactggtggtgttttgaacttagatggt
catagtgggaaaatcttaaaggtttctattcatccttatacatgcaaagttcaatttgct
gcttccctggattctaatggactgcttcttttttggtcactttctaacatttcaaactgc
attttgggatgtccaactttggttcctactatggaactctgcggaaagcttgccactcaa
gactcatgctccttgtacacaagcttgacatgggcaccttcaatacttggtgacaaactg
tttttttttatgggacatacccggggaattgattgcttcattgtcaatatttgtcgaact
gaagaggaaaacatagaatgtcactacttatgcactattcctttcaatggtcatggtcct
tatgaagacgggcctttagatatcttcacaattcctttgaactccacctgtgacaaaact
ttttgcagcagtaaacttatgctcttggcagtatggatggggagatttcaggccctatca
tgggaagttagcttgcactcatttgacatgttgtcaaacagttgtgaatgcaattttgat
gctaaaagcattgatgactgtagtgtttgggcgtttgaaagtacatttgctgataaaaaa
tattacgttactgtaaatccatgttcatgtgagtttccaagttccaatgatctagttact
agttttgctgtggctaatccaggcactgtaagccatatacaacaagagtttggctttgca
aatgatctttgtagtaactatcctacatacattatggtcacagggtcctccgatggcatc
ttgaaactctggaaaagtataccagggaactcattgacacaacacttgccatgggaactt
gtgggtgtgcttgttgcacatgatggtcccatcaagggtatatgtttctctgattgtggt
gagaagattgccacaatcggtcatgagagcaattccaatgatatcaataccatacatata
tgggatgctgtaccattaatcagtgcagggacttttattttggaggataaaataaagact
gatagtgatgttatcgctctaaggtggttaactttaggaacaggggagttattgcttgga
gtttgtttgcataatgaattgcaaatatatgctcccaagcattgtattggtacaactttt
ccgaactctgtaaattttccaaaagtgaatatatgggttcgcattgcatttgctcactct
tccattccaatttatgatttcttatggggacctagagctgcagcagtgatgattcataca
aattactttagtatatttagtcattggttgttccacatggataaaaagcaagggagtaat
tttcatccatgtgattcaaagtctaatgcttataattgtgaggatgaaatatatgaagac
gtactttctgcggtttttactgaacacattggtgctttcatagaacaaacaaatggagac
agtcaagtagattttaattctgtggagtccataaaaaaaatcaatatgaaggacaattcc
agtagcttgttcttggccaaggaacaattgaaatttgaacttctaaccaaggttggttta
tggagcatcttagaagtaactgagataatcagtggatccttgcctacatatcaccctgat
gtactacttattaatatcagttcaggaaactggaaacgtgcttatgtagctgttaggcat
cttgttgaatgcctgacttctacatatgatcctaaaaggagacacatccctaaaagaatt
tgtcttccaaatattgtattatctaattatctcgaaggccgtatatcaaaaggttcccag
ggtaagggatttcaatggggtggggattcggcatcaatcacatcaatttcacaggctcaa
agtagcctgttcccatttccatatcattcaggctccaatgctgaaaatgatagcattttc
tcaacaaaatctgagcttaatggctttattgaatctcttgagaattttactgatttacca
cttttgattggcgtagagaagacacagattcttgctattattgatcttcttagtgaagtt
agtagtgcacactcatcgtctgcatatcagagtcttgatgaacctgggcgaaggttttgg
gttgtactacggtttcggcaactgctttttctccggaagtttggtaaagctgcttctttt
gaagagttgcttgttaactcaagattgtttgtatgggcttatcactctgatagcctagat
aatttatttggttctgtcatacccaatgaaccatcgtggcaagaaatgcgtgctttgggt
ttgggcttttggtatgctaatatacctcaattacgtgcaaggatggagaaattggcaaga
gctcaatatttgaagaacaaaaatccaaaggattgtgctttgctgtatattgcattgaat
agaattcaagttttggccggccttttcaaaatcagtaaggatgagaaagataagcctctg
gtgggctttctttctcgcaattttcaggatgagaaaaataaagctgctgctttaaaaaat
gcttatgttttacttggaaggcatcagctggaattagcagttgctttctttttgcttgga
ggtgatcattcttctgctataaacgtttgtgctaagaatcttggggacgaacagcttgcc
ttagtcatttgtcgacttgttgatggccacgggggacctttggagcgtcacctaattaca
aagtacatacttccatctgcaattgataaaggagactactggcttgcaagccttctggag
tgggaaatgggtaattactacaaatcttttcatagaatgctagagtattcagtacaccct
gtgcctccagagtccactgtcatgtccaattgtggtcattttctggaccctaccattggt
ttttattgccaaatgctagcaacaaagaatagcatgcggaatgccattggggagcacaat
tctgcaattcttttaagatgggcaactttgatgacagttgcttccttaaaaagaagtggt
aatcctcttgaagcattggagtacttctcatcttcaccaagcatgcctgggactgcaaat
caagacagtgaattaggtgacagtcatgatgtgctgtctgatactctgatgcctttacct
agaaaatgctctaactggttgtctgctaatgtttctatgcatctggagttccatattaaa
ttgaatttggcactttgctacttttcaaaattgataagagagcatccaagctggcttgac
actttttcagaatacaatgaagaaccttctgattctgacgagtacatgaagtactatgag
aaatcagtggaaagttttaaacaaaagttatacagcgggcttgccctatttgaacagagg
tttttattggctccccactgtctaatcggcatgattttactcttactttgccatcatgga
tcattgtgcattgggtatgatatgacagatggatatactcaaggagaactgtctcaaaag
aagagtgatatgcttgaggatttcaatttatatcactctaggattacacccctctttaag
actgccgaagaagtctcctttttctattcaagattattttgtgcctgcagcatggaaagt
tctcaacaagatctgcttattgatggcaaacctaagtttttggatgcttcgcagtgctgc
atagaaggtgtttttgtttcattgtggtttttaaaagcaactttgaggatccagttgagt
tctattagcaaagatctgatcaaaccgcttcttgatatcctagatttttatgagtactat
ttgcttttttcattagcctggcttcagaaaaactcagaagtgcttttgtatatggttgaa
ccattctttgttgcacaatctaatggccgcaatccttatgatgttgatatggtgaatcta
aagaagcttattccaaaaattggacagttgttggctcaaacttcttccatacctagtata
caaaaccttcaattgtctgaacatgatataaaacattcaattcctgatgatgaaagatgg
aagattttagggacctgcttgtggcagcatatgtctagattcatgatatcaaattcgaat
tctgttcttgccaaacttgaagatggtaatttgtctggtcttttccgtagaaagtatgct
tatggagagtcttgtatcatcaatatggattctgaaaccattagcttgccagagaagatt
cggatagtctcatatagcctatgtgatctactgataacatcagctactcacatctcttct
tatcatgttaaacaacatgcagagtttctgtggcagaaagtaaagaatgattcgaatgta
aagactcttgaatggttaaaacagaaatctgaattcagtcagaaccaaaacctgaatgtt
ttggaactggggaacaggaaagattattcagttcatcagttattatgggatcacagtgca
gatcccaaattgatatttgattgctttgcacaggaaaaactcaattggccaaatgatttg
gatcatatgcacactaaggggtggaatgacttgtcaatgattatgacagggctgcataac
actgatgatacatgtggcgacgaatttaatcttagatcttctaatcatgaagttggaact
cctgttaaagaaacatctctaaatggtcatccttctgcaggatcaaacaagaaagatata
acttccacaaattttgcagttttccagagtccaagagaaatgtacaagagaaatggggaa
cttttggaggcattgtgtataaactctacttgtcaacaggaagctgcagttgctagcaac
aagaagggtatagtgttctttcatctggaagatgagacaccacacagtggtaaattaaat
ggtcttttatgggccacagctgactggcctcagaatggatgggcaggttcagaatccacc
cctactccaacatgtgtttctcctggtgttggacttgggagcaagaaaggggcacacctt
gggctgggtggagcaactgtcggggtgggctcttcagcttggcccaacaatgacttgaca
ggtgctggagtattaggaatgcttggttatgctgagattggtgcctcaagattaggttgg
gaaattcaacaagattttgaagattttgttgatccacctgctactttggagaacataagt
accagggctttgtctagtcatccaatgaggccattcttcttggttggttccagcaataca
cacatttacttgtgggagttcaacagagacaaagctactgctacatatggagttctgcct
gctgccaatgtccctccaccttatgcccttgcatcaatttcagccttaaagtttgaccac
tttggacaccggtttgccagtgctgcattagatggaactgtctgcacatggcagctggaa
gttggaggaaggagcaatgtccgtccaacagaatcatctctttgctttaatggtcatgct
tcggatgtcacatatttttcctccagtggatcgataatagctgtggctggatatagctct
aatggtgttaatgtggtcatatgggatactttagctccacccacaacttctcgtgcatcc
attttatgtcatgaaggtggtgcacaaaccgtgtctgtttctgataatcatgtggggagt
ggttctgtatccccccttatagtgactggtggtaaaggtggtgatgttggacttcatgat
ttccgctatatagctactggaaaggctaaaaggcacaggcgtgctgataacattgcacaa
agctctgcctcatctttggctcgtgacaaggaccagaatgtagaagggatgctttggtac
attccaaaggctcactcagggagtgtcacaaaagtagttaccatccccaataccagcttg
tttttaactggaagcacagatggagatgtcaaactctgggatgcccagagcacaaggtta
atacatcactggtcaaagatacatgaaaaacacacttttctacagccaagttctcgtgga
tttggtggtgtagtgcgggctgctgtaacagatatacaaattgtttccaatggttttctt
acatgcggtggggatggaactgtaaagctggtgcggcttgacaatcacctgcgtggcaat
tga
DBGET
integrated database retrieval system
