Vigna umbellata (ricebean): 124820221
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Entry
124820221 CDS
T09662
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124820221
09123 Folding, sorting and degradation
03018 RNA degradation
124820221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124820221
03041 Spliceosome [BR:
vum03041
]
124820221
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124820221
mRNA degradation factors
5'-3' decay
Lsm complex
124820221
Spliceosome [BR:
vum03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124820221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
124820221
NCBI-ProteinID:
XP_047147828
LinkDB
All DBs
Position
Unknown
AA seq
149 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGRDDGPGGRAKGIGRGLEEG
GPKGQGGGRGRGGPGGKPGGIRGAGRGRG
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccctttcccttctcaagactgcccaaggccacccaatgttggtggaactgaaa
aatggggagacttataacggccatttggtaaattgtgatacatggatgaacatccatctc
agagaagtcatctgtacatctaaagatggagatagattttggcgtatgcctgagtgctac
attcgtggtaataccattaagtaccttcgggttcctgatgaggttattgacaaagtccag
gaagaaacaaagagccgtaccgatcgcaaacccccaggtgtgggacgcggaaggggaaga
ggtagggatgatggccctggaggacgggcaaaaggaattgggcgtggccttgaagaaggt
ggaccaaaaggacaaggaggaggtcgaggcaggggtggtccaggtggaaagccaggtgga
atcagaggtgcagggcgaggtagaggttaa
DBGET
integrated database retrieval system
