KEGG   Vigna umbellata (ricebean): 124820284
Entry
124820284         CDS       T09662                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:vum04812]
    124820284
Cytoskeleton proteins [BR:vum04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     124820284
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_SCAP ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 eIF2A Beta-prop_TEP1_C Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_HPS5 VPS8_N Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_WDR75_2nd WD_LRWD1 FIMAH
Other DBs
NCBI-GeneID: 124820284
NCBI-ProteinID: XP_047147902
LinkDB
Position
Unknown
AA seq 760 aa
MAKTGYKLQEFVAHSGNVNCLKIGRKASRLFITGGDDHNVNLWMIGKATSLMSLCGHSTT
VESVTFDSAEILVLSGASSGVIKLWDLQEAKMLRTLTGHRTNCTAVEFHPFGEFFASGSS
DTNLNIWDIRKKGCIHTYKGHSQAISTIKFSPDGRWVVSGGFDNVVKVWDLTGGKLLHDF
KFHEGHIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSSRHEVSGVCSLTFHPDGWT
LFAGLEDSLKVYSWEPVICHDAVDMGWTTLGDLCIHDEKLLGCSFYSNSVGVWVSDISLI
KPYGDGLETENKESTEQKLSLQGRQMEKVEYGVDNESKEIKNIYIDSSEGNPDHLLRSRS
YNSPKMDHLEESKEMLNLSSATRVRAKSNEQTLRKSYIVSNVAPLDILNDIDFREFVDTI
RNSDSATNPNFEMNEVRDSIDDKHPIESVAEKFEKTLTPDGFSEQEKCNQSSSYSNAINP
VKYANGVAVVQGRTRSLVKRFERKEITPTKEDQDNATPTTTVENREIFLKEDQTNASPIT
TTSTSEKGEIIPFSEDKNNMPTVPNTTSETDKHMNFMKAEFGRDSNPANDGEIIEYLLQT
HDVTLSNLRSRLTKLQVVRHFWERNDTKGAINALEKLPDQSVQADVISVLVVKMEILTLD
LFSCLLPVLTGLLDSKTERHVKVSLDMLLKLVVVFGPTIRSTISAPPSVGVDLHAEQRRE
CSNQCFMQLQKIRMILPILVRRGGVLAKTAQELNLILQQP
NT seq 2283 nt   +upstreamnt  +downstreamnt
atggcaaagacaggatacaagctacaggaatttgtggctcattcagggaatgtaaactgt
ttaaagattggaaggaaggcgagccgccttttcattacaggaggggatgatcacaatgtc
aatctatggatgattggaaaagcaacctctttaatgagtttgtgtggtcactctactaca
gtagaatctgtgacttttgactcagcagaaattttggttctttctggagcatcatcgggg
gttataaagctttgggatttacaggaagcaaagatgcttcgcactcttaccggacacaga
accaattgcactgctgttgagtttcatccctttggagaattttttgcatcaggctcctca
gacactaatctaaatatttgggatatccgaaaaaaaggatgtattcatacatacaagggc
catagccaggccattagtactatcaaattcagtccagatggtcgttgggttgtttctggt
ggatttgataatgttgtgaaggtctgggatctaaccggtggaaagctcttgcatgacttc
aagttccatgaaggacacattaggtccctagacttccatcctcttgagtttcttctggct
acaggttcggcagacagaacagtgaaattttgggatttagaaacctttgaattgattgga
tccagtagacatgaggtttcaggggtatgctcactaacttttcatccggatggatggacc
ctttttgctggacttgaggatagtttgaaggtgtattcatgggaacctgtcatatgccat
gatgctgttgacatgggatggacaacacttggtgacttatgtattcatgatgaaaagctt
ttgggttgctcattctacagtaattctgttggagtatgggtgtcagatatttcgcttatc
aagccatatggtgatggcttggaaactgagaacaaagaaagcacagagcagaagctcagt
ctccagggaagacaaatggagaaagtagaatatggtgtggacaacgagtcaaaagagata
aagaatatatatatagactcttctgaagggaatcctgatcacttactaagatccaggtcc
tataattctccaaaaatggatcatcttgaggaatctaaagaaatgttaaacttgagttct
gcaacaagagttcgagcaaaatcaaatgaacaaactcttagaaagtcttatatcgtgtca
aacgttgcacctctggacattctcaatgatattgattttagagaatttgttgatactata
aggaactctgacagtgcaacaaatcctaacttcgaaatgaatgaagtcagagactctatt
gatgataaacatcctattgagagtgtcgcagagaagtttgaaaaaactttaacaccagat
ggattttctgaacaagagaaatgtaatcaatcctcttcttacagcaacgccattaatcca
gttaaatatgccaatggagttgctgttgtacaaggaaggacacgttctttggttaagagg
tttgaaagaaaggaaataactccaaccaaggaagatcaagataatgcaactcccacgaca
acagttgaaaatagggaaatttttctcaaagaagatcaaactaatgcatcccccatcact
accacctcaacatctgaaaagggggaaataattcctttcagcgaagataaaaacaatatg
cccactgttcccaacacaactagtgaaactgataagcatatgaacttcatgaaagcagag
tttggaagggattcaaatcctgcaaatgatggagaaataattgaatatctgttgcaaact
catgatgtaacattaagcaatctccggtcacgtttgacaaaattacaggtagtgcgacat
ttttgggagcgcaatgatactaaaggtgccatcaatgctttggaaaagctgcctgatcaa
tctgttcaagctgatgttatcagtgtccttgttgtgaagatggagattctcaccttagat
ttattttcttgcttacttccggtgctcacaggtttgctggatagcaagacagaaagacat
gtgaaagtgtcattggatatgctgttgaagcttgttgttgttttcggtccaacaatacgt
tcaactatttcagctcctccctctgttggggttgatctacatgcggaacaaaggcgggaa
tgctccaatcagtgcttcatgcaactgcaaaagatccgaatgattcttccaatattagta
aggaggggtggcgtattggccaagactgctcaagagctaaatttaattcttcaacaacct
taa

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