Vigna umbellata (ricebean): 124820563
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Entry
124820563 CDS
T09662
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124820563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124820563
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124820563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124820563
NCBI-ProteinID:
XP_047148234
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MAGKGGATPATYSPSLTADKKKPPFFKEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYA
EFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPVRGQGSDHKEYSAMLNKAL
EGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGIMMYDLVASVSVSSFSK
NLVIDPILEEENCQDGSLTITCMPSRYEITQLTVTGEWSSPKINEGMQLCLDACAKLAKI
MRSCLKEAASDSRE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaaggtggagctactccggcgacatactcgccatctctgacagccgataaa
aagaaaccaccgtttttcaaggaagattgggttcggcccgatggccgaggtttccaccag
tgcagacctgcatttttcaggactggtgctgtgaatgcagcatctggatctgcatatgct
gagtttggaaataccaaggtcattgtatctgtatttgggccaagagagagcaagaaggca
atgatgtacagtgatatagggcgcttgaattgcaatgtgagctttacaacgtttgcaact
ccagtacgagggcagggttcagaccacaaagagtacagtgcgatgcttaataaagctttg
gaaggtgcaataatactggaaagtttccccaagacaactgtggatgtttttgcattggtg
ctagaatctagcggcagtgatctcccagttgtcatatcctgtgctagccttgccctggct
gatgctggaataatgatgtatgatcttgttgcctcggtttctgtgtcaagttttagtaag
aaccttgtgattgatcctattttggaggaggaaaactgccaagatggtagcttaacgatt
acatgcatgccctctcgctatgaaatcacccaactcaccgttaccggggaatggtcttcc
ccgaagatcaacgagggaatgcagctgtgcttggatgcttgtgcaaagctagcgaagatt
atgagatcatgcttgaaagaagctgcttctgattccagggagtag
DBGET
integrated database retrieval system
