KEGG   Vigna umbellata (ricebean): 124820918
Entry
124820918         CDS       T09662                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03030  DNA replication
vum03410  Base excision repair
vum03420  Nucleotide excision repair
vum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124820918
   03410 Base excision repair
    124820918
   03420 Nucleotide excision repair
    124820918
   03430 Mismatch repair
    124820918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vum03032]
    124820918
   03036 Chromosome and associated proteins [BR:vum03036]
    124820918
   03400 DNA repair and recombination proteins [BR:vum03400]
    124820918
DNA replication proteins [BR:vum03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124820918
  DNA Replication Termination Factors
   ELG1-RFC complex
    124820918
Chromosome and associated proteins [BR:vum03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124820918
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124820918
  Check point factors
   HRAD17(Rad24)-RFC complex
    124820918
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 AAA_16 RuvB_N AAA_29 AAA_22 RsgA_GTPase AAA_5 AAA_23 nSTAND3 ABC_tran AAA_24 ATPase_2 NB-ARC nSTAND1 TsaE
Other DBs
NCBI-GeneID: 124820918
NCBI-ProteinID: XP_047148663
LinkDB
Position
Unknown
AA seq 354 aa
MLWVDKYRPKTLDHVMVHTDIAHNLKKLVKEQDCPHLLFYGPSGSGKKTLIMAVLRQMFG
SGAEKVKVENRTWKVDAGSRSLDIELTTLSSANHIEISPSDAGFQDRYVVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQILEVLELIGRKEELQLPAGFAARIAEKSNRNLRRAILTFETCRVQQY
PFTNKQTIPPMDWEEHISEIASDIMKEQSPKRLFLVRGKIYDLLINCIPPEMVLKRLLHE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKSFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtagacaaatatcgtcccaaaaccctcgaccatgttatggtccacaccgat
atcgctcacaatctcaagaaattggtgaaggaacaagattgcccccatttactcttctat
ggcccttctggctctggcaagaaaaccctaatcatggccgttctccgccaaatgtttgga
tctggtgctgaaaaggtgaaggtggaaaataggacgtggaaagtggatgctgggagtaga
tctcttgatatagagttgacaacattgtcaagtgccaaccacattgaaataagtccgagt
gatgcaggatttcaagacagatatgttgttcaagaggtaatcaaagaaatggctaagaat
agacccattgatactaaggggaagaaaggatttaaagtactcgtgctcaacgatgttgac
aaactctctagagaggctcaacattctcttcggagaacaatggaaaaatacagtgcttat
tgcagactaattctatgctgcaatagttcttctagagtcacagaagcaatccgctctaga
tgtctcaatgtaaggataaacgcaccaagtgaagaacagattcttgaagttttagagctc
attggtaggaaagaagagctgcaacttcctgctggttttgctgctcgcattgcagagaaa
tcaaatcggaatttaaggagggcaatattgacatttgagacttgtcgtgtgcaacagtat
cctttcactaacaaacaaacaattcctccaatggactgggaagaacatatttctgaaatt
gcatctgacataatgaaagaacagagccccaaaaggttgtttctagttcgagggaagatt
tatgacttgctaataaattgtattcctccggagatggttttgaagaggcttcttcatgag
ctgttgaggaagctggatgcagagctaaagcatgaagtatgtcattgggctgcatattat
gaacaccggatgcgtcttggacaaaaggcaatctttcacatcgaagcatttgtggccaag
ttcatgagcatttataaatccttccttattgcaactttcggctga

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