Vigna umbellata (ricebean): 124821021
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Entry
124821021 CDS
T09662
Name
(RefSeq) transcription factor bHLH140 isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124821021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124821021
Enzymes [BR:
vum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
124821021
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
124821021
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
124821021
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
124821021
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
124821021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
AAA_33
Macro
zf-C2HE
HIT
AAA_18
Zeta_toxin
AAA_16
AAA
nSTAND3
POT1
AAA_7
Motif
Other DBs
NCBI-GeneID:
124821021
NCBI-ProteinID:
XP_047148773
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MKLLHPEVSFYNLHFIHEMNHGIETLSLILCLDVLNAEGKPVMVILVGAPGSGKSTFGED
VMRSSTRHWVRVCQDTIGNGKAGTKAQCLSSATSALKDGKSVFIDRCNLDREQRSEFIKL
GGGLQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGRAAAVVNRMLQHKELPKLSEGFN
RITFCQNENDVKNAINLYSSLGPLDNLPHGCFGQKNTDSKIQVGIMKFLKRAEVPLAAAS
TTSGTEEPTSQTPRNNSYCKDKEALSSISDTDNLETKEVERQEVGSAGSAGSHANPVCPD
DIPTLAFPSISTSDFQFNLEKAADIIVEKVAEFLNKFRNARIVLVDLSHKSKILSLVKAR
IAEKNMDTQKFFTHVGDITHLYSRGGLRCNAIANAANWRLKPGGGGVNAAIFNAAGPELE
SATKDKVKSLSPGNAAVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNYLNNDYNKGCK
ILQDAYTSLFDGFASIVRNHPGIPEGKGEKLERKSLELPVQSDCSSRKYFTGTDQKSKRS
DDHGSEKSKKCKGTQDDLGLPFTDSKGEKVDSEHRRIERSRSKAWGSWAQALQQIAMHPE
KHKGDLLEISDDVVVLNDIYPKAQKHVLVLARTGGLDCLADVQKEHLQLLNMMHDVGLKW
VEKFLSENASLVFRLGYHSAPSMRQLHLHVISQDFESTQLKNKKHWNSFNTAFFRDSVDV
MDEVSSDGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQSPFPAYLLQKGRLV
HAPGEPRNSVQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttctgcacccagaggtttccttctacaaccttcacttcattcacgaaatgaat
cacggaattgaaaccctttcgctgattttgtgtctcgatgtcttaaatgcagagggcaag
cccgttatggtgatcctggtaggagcacccgggagtggtaaatccaccttcggcgaagat
gtaatgcgttcatctactcgccactgggttcgcgtttgccaggacactattggaaatggc
aaagcaggaactaaagctcagtgcctaagcagtgcaactagtgcattgaaggatggaaag
agtgtatttattgacaggtgcaatcttgacagagaacagcggtcagaattcataaaactt
ggtggtggactccaaatagatgtccatgcagttgtacttgatcttcctgcgaagctttgt
atttctcgatcagtcaaacgaactgggcatgaaggaaatttgcagggtggaagagcggct
gcagttgtgaatagaatgcttcaacataaagagcttcccaaattaagtgaaggctttaac
cggataacattttgtcagaatgagaatgatgtaaaaaatgcgattaatttatacagctca
cttgggccactggataatcttccacatggctgctttggccagaagaatacagattcgaaa
attcaagttggcataatgaagttcctaaaaagagcagaggtcccacttgctgctgcatct
acaacgagtggcactgaagagcctacttcccagactccgagaaataattcgtactgcaaa
gataaggaagcgctttcctcaatttcagatactgacaacttagagacaaaggaagtagaa
aggcaagaagttggttctgctggttctgctggttcgcatgccaatccagtttgtccggat
gatattccaactctggcatttccctctatttcaacatctgatttccaattcaatcttgag
aaggcagctgatattatcgttgagaaggttgcagagttcttaaataagtttaggaatgcc
agaattgttcttgttgacttatctcataagtcaaagattttatccttagttaaagccaga
attgcagaaaaaaacatggacacccaaaagttttttacccatgttggggacattactcat
ctttattccaggggaggtttgcgatgcaatgccattgctaatgctgccaactggaggttg
aaacctggaggtggaggtgttaatgcagcaatttttaatgctgcaggtccagaactggag
tctgcaacaaaagataaagtaaaatctctttcacctgggaatgctgctgttgtccctctg
ccttcatcttctcctttgttcaccagagagggtgtaacccatgtaatacatgttcttgga
cctaatatgaacccacaaagaccaaattatctaaataatgattataataaaggctgcaaa
attctgcaagatgcttatacttcactctttgatggttttgcgtctattgtgcggaaccac
ccagggataccagagggaaaaggtgaaaagcttgaaaggaaatcattggagttgccggtt
cagtctgattgttcttccagaaaatattttacaggtactgatcaaaagagtaagagaagt
gatgatcatggatcagagaaaagcaagaaatgcaagggaactcaggatgacttaggattg
ccctttactgattctaagggtgaaaaggtagattcagagcatagaagaatagagaggagc
aggagtaaggcttggggatcatgggctcaagctcttcaacaaatagctatgcatcctgaa
aagcataagggtgatttgcttgaaatttccgatgatgttgttgtattgaatgatatctat
ccaaaggcgcagaagcatgttctggtgttggcacgaactgggggtcttgactgcctcgct
gatgtccaaaaggagcaccttcagttattgaacatgatgcacgatgtgggtttaaagtgg
gttgagaagttcttaagcgagaatgcttctctggtatttcgacttgggtatcactcggca
ccatcgatgcgacaactacatttacatgttattagccaggactttgaatcaacacaatta
aagaataagaagcactggaactcatttaacactgctttctttcgtgactcggttgatgta
atggatgaggtctctagtgatgggaaggcaacgttgaaagatgatgacaagctactctct
atggagttgaggtgccacagatgtagaagtgcccatccaaacataccccggttaaaatct
catataagcagctgccaatccccatttcctgcatacctacttcagaaaggacgtttagtg
catgctccgggggaacctcgcaacagtgtacagtag
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integrated database retrieval system
