KEGG   Vigna umbellata (ricebean): 124821154
Entry
124821154         CDS       T09662                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-H1-1
  KO
K06634  cyclin H
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03022  Basal transcription factors
vum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124821154
  09124 Replication and repair
   03420 Nucleotide excision repair
    124821154
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vum03021]
    124821154
   03400 DNA repair and recombination proteins [BR:vum03400]
    124821154
Transcription machinery [BR:vum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     124821154
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     124821154
SSDB
Motif
Pfam: Cyclin_N TFIIB Cyclin_C_2 DUF3730
Other DBs
NCBI-GeneID: 124821154
NCBI-ProteinID: XP_047148967
LinkDB
Position
Unknown
AA seq 333 aa
MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEXDVDGSLSYPEPPMTA
KDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVM
EHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPY
RSVEGFIIDMEGFCNGGDDQLQMLKTLQDTARLEVDTMMLQMQHFFYFLWLALAALGNSN
ALHNVIDFDSYLESIFKVRIPCTNAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCW
GHSSHDEGKKREKKSKHKSKRSSNEAQNMASLA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggctgatttcatgacctctactcatcgagtgaagtggatttttactcctcaacagctg
gttgagaaatataaagcagctaatcagagagccaaacacattctagagaagtatggtgca
actctaatggagntagatgttgatggatcattgtcatatcctgaacccccgatgactgca
aaagacagtggtgagaagcattctcggacaaaacctcttagtattgaagaagaacaatgc
atacgggtattttatgaaaacaagctacaagaagtatgtaacaacttccgcttccctcat
aagatccaggcaacagcccttatctattttaaaagattctatctacaatggtcggtgatg
gaacatcaaccaaaacatattatgttgacctgcatatatgctgcttgtaagatagaagaa
aatcatgtgtcggctgaggagcttggtaaggggatctcacaggatcatcaaatgattctc
attaatgagatgatagtttatcagagtttggaatttgatctaattgtgtatgcgccatat
cgctcggttgaaggttttataattgatatggagggattttgcaatggtggtgatgatcag
cttcaaatgcttaagactttgcaagatacagcaaggttggaagttgatacaatgatgctt
cagatgcaacacttcttttatttcctctggttggccttggctgctctgggtaactcaaat
gcactgcacaatgtcattgactttgatagttatcttgagagcattttcaaggtcagaatt
ccatgcaccaatgccgagcttgctgaatcactgcatgcaattgattcctgtgttaaaaag
tacaaaattccttctgagaaggaattgaagcatatcaaccgaaaactgaagtcttgttgg
ggtcatagctctcatgacgagggcaagaagcgggagaagaaatcaaagcacaagtccaaa
aggagctcaaatgaggcacaaaatatggcatctcttgcctag

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