Vigna umbellata (ricebean): 124822140
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Entry
124822140 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHORTAGE IN CHIASMATA 1
KO
K28108
shortage in chiasmata 1
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vum03036
]
124822140
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124822140
BRITE hierarchy
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Paralog
GFIT
Other DBs
NCBI-GeneID:
124822140
NCBI-ProteinID:
XP_047150066
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Position
Unknown
AA seq
1686 aa
AA seq
DB search
MRTRFLNNDYFALPPSQTIPFLYLPVPRLPPTAPSSVHHHLRFDPPLNLSLHLEPFPVQA
ALTAFLAAVLPHRIRIHSRDLTAFDPAQEAEVIFEDRGSATETKSSNESKTIVLGDKNDV
VYETIQFETPELDVFLEIICVTESERMQMLSQTPEVENCPEMLKKPEPSKQYPYEALESV
SFVEDVISEYLMGEKAYSLEDHISVQQLPRSDQNIFLILEVDEGGLRHVKQVLLFSLKEM
LKKPEPSKQYPYEALESVSFVEDVISEYLMGEKAYSLEDHISVQQLPRSDQNIFLILEVD
EGGLVIPTGISLVGVVDSYFENIRSQHFDEQCQSIAEGKELLGSIKHSMMEFFSDECESR
KSLELSDMFPESDFMNILETEHVNGSTGLQRTSHTNSDLLDNLVTFQEFEFLDEDLMQAF
EAFYKTKTPDDLITKDCMFKKEFNFKSFDELIVSNEIALTDNTFKSLPVPVISDQQRMIN
LHDIIGEQISSLKTRPLSASDGIYLNWDLLEEDRCNRKISNWYXDILAKIDLNYEDFVGK
PFDYGKLVFGLVFCDDTLSECETKQDEELQKMLSDCMPLIDNPPVEFASGKILEHVSFKQ
GSGEQLPEKTAERASFLFKSMSEISNLDYFLNPQKMTGEGNYNYAVESNNTNVSIPKVSS
TELKVDTLTLGSHTVLHRVKLSDNIVALAGYFKESYLAILHRDTEMTKTHKSNVDYFKLL
SLQRQKLFEYHANGNNMAFIVLCAIKQAAWYLCFYGLHPAFLYLDKLCQNLGYLKSRLGI
HKSLIEDEKRKVDNNVTLAHPSLTIVKEIFQSYIKRDSLKTLIVAEEVFWSSLKTLLISL
GLSFSEQNGPTRNHPYANTGPEGTDTKMKELMISDCLLVSHRHVSTLFLLNKFDIILEYG
GSYASSRISDISKNLVGLPHLHFLTVEFDGHAALKALCEGVELHPNTEMLLESETRPIFN
HKESMMNQNVERLLNFCPVEQSYDKISSNVAPEVDHIVPLIPALKTEQGLKNMEALPGTV
IIVNTQNVDKEMIMSRRSSYQVILAMEKEGIQVVERDLNLPADIILSSAVCLAWYDSENL
GKKATPTTEASSSLPLCVENIATDVLTLLSFYFHGCFLVFEGEFNFLSTVMESSDGLYAA
ATSLGIDLQIFFSYSPELTNEVIVSCIKTATNTTRGLYPKMPDSVTLAESFLTEFPGINP
LTAHSILSSGVMLNEFLAWSHEQRMHVLEKYHVPEESISLFSVFCRYGEREDSKSIMTDC
SSSVSSGLDSDRCCLYQVQNERKRKHSISSHHMDELRCDELTQFETLNPAVEAAPDSSTL
PKLFNFVIPKNDERSSEFAKTSLSMSEFFDQKQSINAATMRIRSGVSYSPGNCKAPPKLE
QLRQPGLSLKNKDLPQNEILDIDLMGKSVNWNSLSNSQKLHEDVRGEVVDLTDSPLFDKS
FDIPDSVYFTNLITETEKDPMRKNKIARTLSFNNCSHPETNSSKIWRSLKDTQGDVDEFH
EPDFGENVFPLDLKSHGNIGLTQASVRNLEESPFKEELSHLSETPLSFARRSASLLKNSP
WTTEFINKVKEKSKLRQKSLSSESSGPYFGYPGNMSKAFKRRSPSTIDFFKYQPGRISGN
VPEQKRQKQSGLSSNSTKKGRYSTSSSSWTPKDKRSTNTLTFGRNGSGGQTRLVWSDKKI
NSFQTQ
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcgctttctcaacaacgactacttcgctcttcctccatcacaaaccattcct
ttcctctaccttcctgtccctcgtctccctccgacagcgccctcctccgtccatcaccac
ctccgctttgatcctcccctcaatctctccctccaccttgaacccttccccgtacaagct
gcgctaactgccttcctcgctgctgtcctcccacaccgaatccgcatccactctcgagat
ctcactgcttttgatcccgcgcaagaggcggaggttatcttcgaagatcgtggctccgca
actgaaactaaatcttcgaatgagagtaaaactattgtgctcggtgataagaacgatgtt
gtttatgagacgatccaatttgagacacctgagcttgacgtgttcctggaaattatatgt
gtcactgagtcggagaggatgcaaatgctgtctcaaactccagaagttgaaaattgcccg
gaaatgctcaagaagcctgaaccatcaaagcagtacccttacgaggctctggaatcagta
tcttttgttgaagatgtgatttcggagtacctgatgggggaaaaggcatattctctagaa
gatcatatttctgttcagcaactgcctcgctctgaccaaaacatatttcttattttggaa
gtggacgagggaggtttgcgtcatgtaaaacaagttcttctgttttccttgaaggaaatg
ctcaagaagcctgaaccatcaaagcagtacccttacgaggctctggaatcagtatctttt
gttgaagatgtgatttcggagtacctgatgggggaaaaggcatattctctagaagatcat
atttctgttcagcaactgcctcgctctgaccaaaacatatttcttattttggaagtggac
gagggaggtttggtaattcccactggcatatctttggtaggagtagttgactcatatttt
gaaaatatcagatctcaacattttgatgagcaatgtcaatccatagcagagggcaaggaa
cttctgggttctataaagcatagcatgatggaatttttctcagatgaatgtgaatcaagg
aagagccttgagttatcagatatgtttcccgaaagcgattttatgaatatactggaaact
gaacatgttaatgggagtactggcctgcagaggacatcacatactaatagtgacttgtta
gataatcttgttaccttccaggagtttgagttccttgatgaagacctaatgcaagccttt
gaagctttctacaaaacaaaaactccggatgatctaataacaaaggactgtatgtttaag
aaagagtttaatttcaagagttttgatgaattgattgttagcaatgagatagcgctaaca
gataacacatttaaatcactgcctgtacctgttatctctgatcaacaaaggatgataaat
ctacatgacattattggagaacaaatttccagcttgaagacccgacccctctctgcatct
gatggaatttacctaaactgggatctacttgaagaagataggtgcaatcgcaagatttca
aactggtattaggacatattggccaagattgatctgaactacgaagattttgtaggtaaa
ccttttgattatggaaaattggtattcggtctagttttctgtgatgataccttaagtgaa
tgtgaaactaaacaagatgaagagttgcagaagatgctttctgattgcatgcctctcatt
gacaatcctcctgtagaatttgcttcgggaaaaatattagaacatgtatcttttaaacaa
ggaagtggagaacaattacctgaaaaaacggctgagagggcttcatttttatttaaatct
atgtcagaaatcagcaatcttgattatttcttgaaccctcagaaaatgactggtgagggg
aattataattatgcagtagagtccaataatactaatgttagtattccaaaagtttcatcc
actgaattgaaggtcgatacactgacactggggtcccatactgttctgcatagagttaag
ttgtccgataatattgtggctctggctggatattttaaagaaagctatctagccattttg
cacagagatacagaaatgacaaaaacacataaatcaaatgtagattattttaaattgctc
agtcttcaaaggcagaagctgtttgaataccatgcaaatggaaacaatatggcctttatt
gtattatgtgctatcaaacaggctgcttggtacttgtgcttctatggtctccatccagca
ttcttgtatttagacaagttatgtcaaaacttaggctatttgaaatcaaggttaggcatc
cacaaatctttgatcgaagatgaaaagaggaaggtggacaacaatgttactttggcacac
ccatcattaacaattgtgaaggaaattttccagtcatacatcaaacgggatagtttgaaa
actttgattgtggctgaagaagtattctggtcctcattgaaaactcttctcatttccctg
gggttatcattcagtgaacaaaatggtcctacaagaaatcatccatacgccaatactggg
cctgagggcacagatactaaaatgaaagaactcatgatttctgactgcttgttggtttca
cacaggcatgtttctacgttgtttctactcaacaaatttgacattatcttggaatatgga
ggttcatacgcatcatctaggatatctgacatttccaaaaacttggttggattgcctcat
cttcactttttgacggttgaatttgatggtcatgccgctctcaaagcactctgcgaaggt
gttgaattgcacccaaacactgaaatgttattggaaagtgagactcgtcctattttcaat
cataaggaaagtatgatgaatcagaacgtggaaagactactgaatttttgtcctgtggag
caaagctatgacaaaatatcttcaaatgttgcacctgaagtagatcatattgtgccacta
attcctgctttgaaaaccgaacaaggtcttaagaacatggaggctctccctggaacagtt
atcattgtaaatactcaaaatgtagataaggaaatgataatgtctagaagaagctcttac
caagtgattctggcaatggagaaagaaggaattcaagtcgttgaacgtgatttaaatttg
cccgctgatataatattaagttctgctgtttgcttggcatggtatgatagtgaaaacctt
gggaagaaagcaactccaacaactgaagcatcctcaagcttgcctttatgtgttgagaat
attgccacagatgtcctaaccttgcttagtttttacttccatggctgctttctggtcttt
gaaggagaatttaacttcctttcaactgtaatggaatcctctgatggactttatgctgca
gcaacaagcctgggaattgatttgcagatattcttctcttactcgcctgaattgacaaat
gaagttattgtaagctgcattaagactgctacgaatacgacaaggggtctgtatcctaaa
atgcctgactcggtaactcttgccgagtcttttcttacggaatttcctggaataaatcct
ttaacggcacactctatactatcttcaggggtcatgcttaatgagtttcttgcgtggtca
catgagcaaaggatgcatgttttagaaaagtatcacgttccagaagaaagtatctctctt
ttcagtgttttctgcagatatggggaacgggaggattcaaaatccataatgacagattgc
tcctcttcggtatcttctggtctggactcagataggtgttgtttatatcaagttcaaaat
gaaagaaaaagaaaacattctataagtagtcatcatatggatgaactgcgttgtgatgag
ttgacgcaattcgagacactaaatccagcagttgaggctgcccctgattcctctaccttg
ccaaaacttttcaattttgttattccaaaaaatgatgagagatccagtgagtttgcaaag
acaagtttatccatgagtgagttttttgatcaaaagcagagcatcaacgcggctacgatg
cgaatccgttctggagtctcctattcaccagggaactgcaaagctcccccaaaattagag
caactgagacaacccggtttatctttgaaaaataaagacttgcctcaaaatgaaatactg
gatattgatttgatgggaaaaagtgtgaattggaatagccttagtaattctcagaagctg
catgaagatgttagaggcgaggtggtcgacttgacagacagccccttatttgataaaagc
tttgacattcctgattccgtgtacttcacaaatttgataacagaaacagagaaagatcct
atgagaaagaataaaattgcaaggacattgtcatttaataattgtagtcacccagaaacc
aactcatctaaaatatggagatctttaaaagatacacaaggagatgtagacgaattccac
gaaccagattttggagaaaatgtttttcctcttgatttgaagtctcatggaaatatcggt
ttaactcaggcatcagtgagaaatttggaagaatcaccattcaaggaagaactgtcgcat
ttgagtgaaactccactctcatttgcacgccgatccgctagtctattaaagaattcaccc
tggacaactgaatttatcaataaagtaaaggaaaagagcaaattgcgtcaaaaatcatta
tcatctgagagttctggcccttattttgggtatcctgggaacatgtccaaagcttttaag
agaagaagtccttctacaattgatttttttaagtaccaacctggcagaatatctggaaat
gttccggaacagaaaagacagaaacaatcaggactttcttcaaactcaaccaagaaagga
agatattctacttcctcatcctcatggactccaaaagataagcgatcaacaaatacactg
acttttgggaggaacggaagtggaggtcaaacaaggctggtctggagtgataaaaagata
aactcattccagacacaataa
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integrated database retrieval system
