Vigna umbellata (ricebean): 124822189
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Entry
124822189 CDS
T09662
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124822189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124822189
03036 Chromosome and associated proteins [BR:
vum03036
]
124822189
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124822189
Coactivators
SAGA/TFTC/STAGA complex
124822189
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124822189
STAGA complex
124822189
TFTC complex
124822189
SAGA complex
124822189
SLIK complex
124822189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
124822189
NCBI-ProteinID:
XP_047150118
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSFVPKETIEVIAQSIGITNLSPDVALALAPDLEYRIREIMQESIKCMRHSMRTFLSTED
VDTALALRNLEPIYGFTSNDPPRFKRAAGHKDLFYIDDKDVDIKDLIEAPLPKAPLDTSI
TSHWLAIEGVQPAIPENAPVEAPPSEIRKSEYKEDGLSVDVKLPVKHLITRELQLYYEKI
TYLTLNKSGSIPFRRALVSLATDSGLHPLVPYFTCFVADEVARNLHNLAVLFALMRLVRS
LVQNSQIHIELYLHQLMPPIITCLVAKRIGSRLSDDHWELRNFSANLVASICQRFGHIYH
NLQPRVTKTFLHSFLDPTKALPQHYGAIKGIEALGSRIIHLLILPNLEPYLHLLEPEMQP
EKQNNEMKRHEAWQVYGALLGAVGKCVHEKVKNFSNLFSPPTRLTSRGSGKAIIPMSGKR
KASADNLMQQQPPMKKLSTDGHGGVIPMNSMSVDMKGSTGGFSTMMGAPVMSMASQISTD
KAAGREVIDEQRKVSATLAQAWKDDIDAGNLVSSVVELFGERVLPFVPNPEAFMFL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtgccaaaggagacaatcgaagtcatcgcacagagcatcggcatcaccaat
ttgtcccccgatgttgccctcgctctcgcccccgatctcgaatatcgcattcgtgaaatc
atgcaggagtcgataaaatgcatgcgccattcgatgagaacttttcttagtacagaggat
gtggatactgcacttgcattgagaaatttggagccgatatatgggttcacctctaatgat
cctccgaggttcaaaagagctgctggacataaggatttgttctacatcgatgacaaagat
gtggatatcaaagatcttattgaagctcctttaccgaaagcaccccttgatacatcaatt
accagtcactggttggctattgaaggtgtgcaacctgcaattcctgaaaacgctccagtt
gaagctcctccctctgagatacgaaaatctgaatataaggaagatgggctttctgttgat
gttaaattacctgttaaacatttaataacaagggagcttcagctctactacgagaaaata
acttaccttacattaaataagtctggatccattccgttcagaagagcattggttagcttg
gcgacagactcaggactccatcccttagttccatatttcacatgttttgttgccgatgag
gtggcacgtaatttacataatttagctgttttatttgccttgatgcgccttgtgcggagc
cttgtgcaaaattctcagatacacatagaactttatttacatcaattgatgccacctatc
attacttgccttgttgcaaaaaggataggaagcagactatctgacgatcattgggagctt
aggaacttcagtgctaatcttgttgcttcaatatgccaaagatttgggcatatttatcac
aatctgcagccacgtgtgacaaagacatttcttcattctttcttggaccctacaaaagct
ctgcctcagcactatggtgcaattaaagggatagaagctcttggatcaagaattattcac
ttgcttatacttccaaatctcgagccatatttgcatcttcttgagccagaaatgcaacct
gagaaacaaaacaatgaaatgaagaggcatgaagcttggcaggtttatggagctttgttg
ggtgcagtaggcaaatgtgtgcatgaaaaggtaaaaaatttcagcaatttgttctctcct
ccaactcggcttacttcaagaggcagtggaaaagccattattccaatgtcaggcaaacga
aaagccagtgccgacaatctgatgcagcagcaacctccaatgaagaaactttcaacagat
ggccatggaggtgtaataccaatgaactctatgtcagttgacatgaaaggctcaacaggg
ggattttccaccatgatgggggctcctgtgatgtcgatggctagtcaaatttcaaccgac
aaggcggcagggagggaggttatagatgaacaaaggaaggtgtctgccactcttgctcag
gcttggaaggatgacattgatgcaggaaatttggtgtcatcagtggttgaattgtttggc
gaaagggtgttaccatttgttccaaaccctgaagcatttatgtttttgtag
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