KEGG   Vigna umbellata (ricebean): 124822205
Entry
124822205         CDS       T09662                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vum03009]
    124822205
Ribosome biogenesis [BR:vum03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    124822205
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 PEP5_VPS11_N VPS8_N Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 ANAPC4_WD40 WDR90_beta-prop_4th PROPPIN Beta-prop_EIPR1 WD_LRWD1 Beta-prop_IFT122_1st TMEM125 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 124822205
NCBI-ProteinID: XP_047150144
LinkDB
Position
Unknown
AA seq 462 aa
MRQRELVGEGEAVVACSDKSMKIGASMWDLETGEKLLHIPTCASPPFGFLCLKNRFLVAS
QLNRHGSVGDGAIAVWSFHKPQQPLLNYTVEAIGTLSCTNDGIYLVGGALSGNVYLWDVT
SGKMLKTWRAHKKCLNCMLFSFDNSLIISSSDDGMICVWSMISLLDIEETRSTPPPLHCL
SGHISSITGLLTAPNSYHSILISSSLDGTCKVWDFISGKHMQTQAYPFAITSIALHQRES
LLFCGTEKGIIFVEKLDVGRGEGPFLVIKRQPLELKGHSGAITALTSSRSSLISASEDCS
ICVWDIFSWEITRRFSLHKAGKVTNLVVVSLSSLLSTSKNRRVSNEYIISPLDKYPQLSN
SIKGTLHSSLYRGNQTCIDLKSSELLKQKIFDTQKVDVPTITTLQMRVEASVKNHVWATN
MTKHVMVINKQLKSTLLGMMQHRLFRPNNINLQKTNRKKPKI
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcgacagagggagttggtaggagagggagaggcagtggtggcttgcagtgacaagagc
atgaaaataggagcgtcgatgtgggacttggaaacgggagagaaactgcttcacattcct
acatgtgcctcgccacctttcggcttcctgtgtttgaaaaatcgcttcctagtggcgtcg
caactcaacagacacggctccgttggcgatggagccattgctgtttggtcctttcacaag
cctcaacaaccacttttgaattacacagtggaggctattgggacactttcttgtacaaat
gatggcatatatcttgttggaggagctttgtctggaaatgtttatctatgggatgtgacc
agtggaaaaatgttgaagacttggagggctcataaaaaatgtttaaactgcatgttattt
tcatttgacaattctcttatcatttctagctcagatgatggaatgatttgtgtttggtcc
atgattagtttgttagacatagaagaaacgagaagtacgccgcctccattgcattgtttg
tcaggacatatatcctccataacaggtcttttaacggcaccaaatagttaccactcaatt
ttaatatcaagttcccttgatggcacgtgcaaggtttgggattttatctcaggaaaacat
atgcaaactcaagcttatccttttgccataacttccattgcccttcaccaaagagaaagt
cttttgttttgcggaacagaaaaaggaataatatttgtcgagaagctcgatgttggtcgt
ggagaaggtccttttcttgtcattaaacggcagccacttgaactgaaaggacacagtgga
gccattactgccttaacctcatctcgatcatccctaatatctgcctctgaagattgttcg
atttgcgtttgggacatctttagttgggaaatcactcgaaggtttagtctccataaagca
gggaaagtaaccaatcttgtggtggtttcactatcttcgttactttctacatcaaaaaac
aggagagtctcgaatgaatatattatttctccacttgacaagtatccgcaattgtccaac
tcaatcaagggaactctccattcctcattatatagaggaaatcaaacttgcattgatttg
aaaagttctgaattattgaaacagaagatttttgatacacagaaagtagatgtaccaaca
atcacaaccttgcaaatgagagtggaagcaagtgtaaagaatcatgtatgggcaacaaac
atgacaaaacatgtcatggtgataaacaaacagttgaagtcaacactattaggcatgatg
caacatagactgtttcgtccaaacaacatcaacttgcaaaaaactaatagaaagaaaccc
aaaatttag

DBGET integrated database retrieval system