Vigna umbellata (ricebean): 124822252
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Entry
124822252 CDS
T09662
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124822252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124822252
Enzymes [BR:
vum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
124822252
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
124822252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
HIRAN
FAN1_TPR
Rad50_zn_hook
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
124822252
NCBI-ProteinID:
XP_047150202
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MTIKMVKMAGDLRVWLFFPLFPFVQRAVVTLEMVLTGRESLIRLIGRRRRFLPNRRSILS
DPIPDPNPNPNPNPSPNPVVEQPPQQPDQSGDVQCPVCGRNLPGDDHNRINSHLDVCLSQ
SQPKPATKRKLSQRTLLELNFSPSNSKPKLQSLSHESNSASFLPLPNNGCEEEENCDKQE
PPEKHETGVNSTLVATSSSSSPSSPLNSGVPDDSKPVDVLGATLETFIVGRRHADNPDEI
CAGTAISLLRDPQNVKDPNAVKVVSGDSACCKSLGFLPRHLAQYLSPLIDNYGLGFQGHV
TSVPKHSLEIVPIQVTCHKTANGESKYADETFICLWKNVQHVVKFERRNPPSTVKYQLNF
FLMLQEALRNNIHLLTEDEKTYMDSFTLLSNESQRLFIRLYTRKGPWFRMSSISYSEIVD
TQKAVKELADKEYIHFIEDANQLCMSDVKDILNVLNVSELREIWSISLKKGGGHGLKKQH
LISSIISSDAGVPWSQLSTMILERSSSCIRISSKSESLMWRTERLFFLNGEQDLSSFLLV
DMGKIKYPAYNCIISEPIFSNRRNLLSYEEAIEVAQIMDESLDTNKIEVVLRCIKLAESR
VSTDFSDRYSTSESVSSIQHLFTASWVYSKVVTVGISFLEQERRYTDAINLLRWLLNVFP
SDLRRGYWTLRLSIDLEHLGFIDESLQVSENGLLDPWVRAGSRMALQRRVLRLGKPPRRW
KVPSYSRSALQKIPQVFVQGRPLNSDLGGKSRYYNEEGKQCGVEELALNYYARDGGGWQG
VHAESGIWLTIFGLLMWDVIYADVPNVFYTRFQNAPLDFGTDGFYTSRKSVIESHLQQIR
DGMAEEFLIKSWETHFGTACRGVNWDSHSLDELRAAVTCVGGTCLASLCQLLAQDYRSWS
SGMPDLLLWRFHGEYSGEAKLVEVKGHNDRLSEQQRAWLLLLMDCGFSVEVCKVKPL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgacaataaagatggtgaaaatggcgggagatttaagggtatggttatttttccctctc
tttccctttgtgcagcgtgcagtagtgacattagaaatggtgctcacaggcagagaaagc
ttgattcgattaattggcagacggaggcgcttcctccccaatcgccgctctatcctctcc
gatcccatccctgatcctaaccctaaccctaacccgaaccccagcccgaatccggttgtt
gaacaaccgccgcagcaaccagatcaaagcggcgacgtacagtgccctgtttgcggccgc
aaccttcccggtgatgatcacaaccgcataaactctcatctcgatgtgtgtctctctcaa
tcacaaccaaaaccggcaacaaaacgaaagctttcccaacgcaccctccttgagttaaac
ttttccccatccaattccaaacctaaactccagagtctctctcacgaatctaacagtgcc
tccttccttcctcttccaaataacggctgtgaagaagaggaaaattgcgataaacaagaa
ccgcctgaaaaacacgagactggagttaattctacacttgttgccacttcctcatcttcc
tcgccttcctcgcccctgaacagtggggtgcctgatgattctaaaccagttgatgtgctt
ggtgccacgcttgaaactttcatcgttggccggaggcacgctgataatccagacgaaata
tgtgctggaaccgccatatctcttttgagggaccctcaaaatgttaaggaccccaatgcc
gttaaggttgtttctggggattctgcatgctgtaagtcgttaggttttcttccccgccat
ctagcccagtacctatctcctcttattgataactatggccttggatttcaggggcatgtt
acttctgttccaaaacattctctcgaaatcgtgccaattcaggttacgtgtcacaaaacg
gcaaatggtgaaagcaagtacgctgatgagacatttatatgcttatggaaaaatgttcaa
cacgttgttaaatttgaaagaaggaatcctccttcaactgtaaagtatcagctgaatttt
tttcttatgctacaagaagcgttaagaaataatattcaccttttaactgaagatgagaaa
acctatatggattcattcactttactctcaaatgaaagtcagaggctttttatccggcta
tacactagaaaaggaccttggtttcgcatgtctagcatttcatattctgaaatagtggat
actcaaaaggcagtgaaggaacttgctgataaagaatacatacattttattgaagatgcg
aatcaactatgtatgagtgatgtgaaagatatcttgaatgtcctcaatgtttctgaattg
cgtgaaatttggagcatttcactaaaaaagggtggtggtcatgggttgaagaagcagcat
ctgatttcatccattatttctagtgacgctggtgtaccttggtcacaattatcaactatg
attttggaaagatctagttcttgtattaggatttcatcaaaatctgagtctcttatgtgg
cgtactgagagacttttcttcttaaatggagaacaggatctgtcgtcctttctacttgtg
gatatgggaaaaattaagtatccagcttacaactgcataatatcagaaccaattttctca
aatcgcaggaatctgctctcttatgaagaggctattgaagtggcacaaattatggatgaa
tctcttgatacaaataaaattgaagtggtattaaggtgcataaagctagctgaatcccgt
gtatctactgatttttctgaccggtactcaacttctgaatcagtatcttcaattcagcac
ttatttacagcatcatgggtatactccaaagtggtcaccgtggggatttctttccttgag
caggagcgcaggtacactgacgcaattaatttgctcagatggctgctaaatgttttccct
tctgatttaagaagaggatattggacactgaggttatcaattgatttggagcacctgggc
ttcattgatgagagtctccaagtatctgaaaacgggttgctggatccatgggtacgtgct
ggttcaagaatggcactgcaaaggcgggttcttcgtctaggtaaaccaccaaggcgctgg
aaagttcctagttattctaggtctgcactgcagaagatccctcaggtttttgttcaaggg
agaccattgaattctgatttgggaggaaagagtaggtactacaatgaagaggggaaacaa
tgtggagtggaagagcttgctttgaattactatgctagggatggaggtggatggcaaggt
gttcacgcagagagtgggatatggttaaccatttttgggctacttatgtgggatgtcata
tatgctgatgtaccaaatgtcttttatactagatttcagaatgctcctttagattttggt
actgatggtttttatacttcaagaaagagtgtcatagaatcccatctgcagcagattcgt
gatggcatggccgaggagtttcttattaagtcatgggaaacacattttggaacagcatgt
agaggagttaattgggactcccattctttggatgagcttcgcgctgctgttacttgtgtt
gggggcacttgtttggcatctctctgccaacttctggctcaagattatcggagctggtct
agtgggatgcctgatttgctgctatggcgtttccatggagaatacagtggtgaagccaag
cttgttgaagttaaaggccacaatgaccgactctccgagcagcagagagcatggctattg
ctgcttatggattgtggattttcggttgaggtttgtaaagtgaaaccgttgtaa
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integrated database retrieval system
