KEGG   Vigna umbellata (ricebean): 124822512
Entry
124822512         CDS       T09662                                 
Name
(RefSeq) exosome complex component RRP43-like
  KO
K12586  exosome complex component RRP43
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124822512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vum03019]
    124822512
Messenger RNA biogenesis [BR:vum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     124822512
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 124822512
NCBI-ProteinID: XP_047150479
LinkDB
Position
Unknown
AA seq 301 aa
MGLPKSSEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRALGKSRETSIFLGAVSTAN
GSALVKIGSTTMLTAIKMEVMTPSLESPNEGCLAVDFFMPPICSPIVRPGRPAEASPVVS
KQLSDTISSSRMIDLKELSLVSGKAAWMTYLDIYCLDADGALFDAALLSAVAALSHLQIP
AVAMNDDGKIVLVSDEDGQNQTQEPVNKEKRKLTLRSIPFSLTCILHKNYIVADPTAEEE
SIVETHLTIVLDTSGQLLSLYKTGGPVLAHPSTIQDCVALTRQRVKEVKGLLDKENSAME
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgggattaccaaagtcttctgaggacttgtcatcggagatggaggttgatgcctttaga
cgccttttcccacttcgttattttgagcgtcatcttgcagaatcaataaggcctgatggt
agggcacttggaaaaagcagagaaacaagtatttttcttggtgctgtttcgactgctaat
gggtcagctctagtgaagattggatcaactactatgttgactgctattaaaatggaggtt
atgacaccctccttggagtcaccaaatgagggctgtctagctgttgatttcttcatgcct
ccaatttgttctccaattgttaggcctggcaggcctgctgaagcatcaccagtggtgtca
aagcagttgtccgacaccatttcaagttctagaatgattgatttgaaagaattgtctctg
gttagtggaaaagctgcatggatgacttacttggatatctattgtttggatgctgatggt
gctctttttgatgccgctttactttctgctgttgctgctttatctcatttgcaaattcct
gctgttgccatgaatgatgatggcaagatagtacttgtgtctgatgaagatggacaaaac
caaacacaggagccagtcaataaggaaaagaggaagcttacattaagaagcattccgttc
tcattaacatgcatacttcacaagaattacatcgtggcagatcccaccgcagaagaagaa
tcaattgtggaaacccatttgacaatagttttggatacatctggccaactactatctctt
tacaagactggtgggccggttcttgcccatccttctactatccaggattgtgtagcgtta
acccggcaaagagtaaaggaagtaaaaggcctcttagacaaagaaaattctgctatggaa
gtttga

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