Vigna umbellata (ricebean): 124822639
Help
Entry
124822639 CDS
T09662
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124822639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124822639
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124822639
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124822639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124822639
NCBI-ProteinID:
XP_047150621
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MGWDICCVVCYFFIPLKGLIYFVLQGHVRARTEIVPDQRERYLQKFQQVQQGQSALLNMP
SYAGGNHKQFSAQQQNPLLQQFNSQGSSVASQSGMGLGVQSSGLSGISSTSVPQPPISVH
SPSSQQSLLSVVSKDPDVGNSMVDESQQQIFPDDSGTESTGTGISKNFMNEDELKSTYAI
IDSPAGVPGSLPEPVQISRGIDLSPGQPLQSNQRTGNLGVIGRNSTDLGLVGDNFSAFTA
NSGGVRDQLYNLQMLEAAHLKLPQPKDSERPRTYTPFPFFPVMQKHPTITPPSFPQVQAP
IVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYMAAKELKKQSWRYHRKYNTWFQRHE
EPKVATDEYEQGTYVYFDFHIANDDMQHGW
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggatgggacatatgctgtgtagtttgttatttttttatacctctgaagggacttatt
tattttgtacttcagggtcatgttcgtgcaagaactgaaatagttcctgatcagagggaa
agatatttacagaagttccagcaagtgcaacaagggcaaagtgcccttcttaatatgcca
tcctatgctggaggaaatcacaagcagttttctgctcaacaacaaaatcctctcttacag
cagttcaattctcaaggctcatctgttgcttctcaatctggtatgggacttggagtccag
tcttcaggtcttagtggtatttcttccacctcagtaccacagccacccatttcggtccat
tccccatctagccaacaatcactgctgtcagttgtttctaaagatccagatgttggcaat
tctatggttgacgagtcacagcaacagatttttcctgatgattcggggactgaatctact
ggtactggaattagcaagaattttatgaacgaagatgaactgaaatccacatatgctata
atagactctccggcaggagtacctggctctcttccagagcctgttcagatttctaggggt
attgatttgtctcccggccaacctttacaatcaaatcagcgtactggtaaccttggtgtt
ataggaagaaattctactgaccttggacttgttggtgacaactttagtgcattcactgct
aattctggtggagttcgtgatcagttatataatttacagatgcttgaggcagctcacctc
aaacttccgcaacctaaggactcagaacgtcccaggacctacactccttttccatttttt
ccggttatgcagaaacatcctacgataactcctcctagttttcctcaagttcaggcacca
attgttaataatccagccttttgggagagagtgggtctagaaccatacggtactgatacc
ctgttctttgcattttactatcaacagaatacttaccaacaatatatggctgcaaaagag
ctaaagaaacagtcttggagatatcaccgcaagtataacacatggtttcaacggcacgaa
gagccaaaagttgcaacagatgaatatgagcaaggaacatacgtgtactttgatttccat
atagcaaatgatgacatgcaacatgggtggtaa
DBGET
integrated database retrieval system
