Vigna umbellata (ricebean): 124822686
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Entry
124822686 CDS
T09662
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124822686
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124822686
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
124822686
NCBI-ProteinID:
XP_047150673
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Position
Unknown
AA seq
636 aa
AA seq
DB search
MSGPGVRLHIQDHHVVMDNGIVQVTLSNPGGIVTGILYNGVDNLLEVLNKESNRGYWDLV
WSAPGSKGIFDVIQGTCFKVIVQNEEQVELSFTRMWDPSLEGKFVPLNIDKRFIMLRGSS
GFYSYGIYEHLNGWPDFDLGETRITFKLRKDKFQYMAMADNRRRILPYPEDRLPGRCKTL
GYAEAVLLTNPKDPHLQGEVDDKYQYSCANKDNRVHGWISFSPPVGFWQITPSDEFRSGG
PLKQNLTSHVGPTTLAMFLSGHYAGQDLVPKIRGGESWKKVFGPVYIYLNSAPVGDDPLW
LWEDAKIQMMNEVQSWPYHFPASEDFLKSDQRGNVSGRLLVLDKYICTDLISANGAYVGL
APPGDAGSWQRECKDYQFWTRADENGFFTIRNVRPGDYNLFAWVPGFVGDYKFVDSMKIT
PGSYTELGELVYEPPRDGPTLWEIGIPDRSAAEFYAPDPNPQYINRLFINHPDRFRQYGL
WERYTELYPDADLVYTVGVSDYTKEWFYAQAPRKKEDNTLQGTTWQIKFEVRSVVKGSTY
KLRVAIASATLAELQIRVNDPNSARPLFTSGLIGRDNSIARLGIHGIYWLYNVNIPGSLL
IDGTNTIYFTQPRCTSPFQGIMYDYIRLEGPPSEGI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccaggggtacggttgcacatccaagatcaccatgtggtgatggataatggc
atagtccaggttacgctatcaaatccaggtgggattgtcaccgggatactatataatggt
gttgacaatttgcttgaagttctaaacaaggagtctaatagagggtactgggaccttgtt
tggagtgcgccaggaagcaaagggatctttgatgtgattcaaggaacttgttttaaagtt
atagttcaaaatgaggaacaggtggagctttctttcacaagaatgtgggatccttctcta
gagggaaaatttgtccccttaaatattgacaaaagatttataatgctccgcggttcatct
ggcttctactcttacggaatttatgagcacttaaatggatggccagattttgatctcggt
gaaacgaggattactttcaagctaagaaaagacaagtttcaatacatggctatggcagac
aacaggcgaaggattcttccttatccagaagatcggttacctggaagatgcaaaaccttg
ggctacgcagaagctgtcctactaaccaatcccaaagacccacatttgcaaggagaggtg
gatgacaagtatcagtattcatgtgcaaacaaggataatcgagttcatgggtggatatct
tttagtccaccagtaggcttctggcagatcacacctagtgatgagtttcgttctggtgga
cccctcaaacagaatttgacctcacacgtaggccccaccacacttgcaatgtttcttagt
ggtcactatgcgggacaagatttggtgcctaaaattagaggtggtgaatcatggaagaag
gttttcggtcctgtatatatttatctcaattctgcaccagttggtgacgacccactttgg
ttatgggaggatgcaaaaatacagatgatgaatgaagttcaaagttggccatatcatttc
ccagcttcagaggattttttaaaatcggatcagcggggcaacgtcagtggcagattactt
gtcttagacaagtacatctgcacagacttaatatcagcaaatggtgcttatgttggcctg
gccccacctggagatgcagggtcatggcaaagagaatgcaaggactatcaattctggacc
agagcggatgagaatggattttttaccattagaaatgtacgtccaggcgactataacctt
tttgcttgggtgcctggctttgttggggactacaaatttgtagattctatgaagataacg
ccaggttcctacactgaattgggtgaacttgtatatgagcctccaagagatggtcccaca
ttgtgggaaataggtattcctgatagatcagctgcggaattttatgctcctgatccgaat
ccccaatacattaataggctttttatcaaccacccagacaggttcaggcagtatggattg
tgggaaaggtatacagaactgtatcctgatgcagatttggtttacacagttggtgttagt
gactatacgaaggagtggttttatgcgcaggctccgaggaaaaaagaggataacactctt
caagggaccacctggcaaatcaagttcgaagtcagaagcgtggttaagggaagtacatac
aaactgagagttgcaattgcatctgcaacattagctgaattgcagattagagtaaatgat
cccaattctgcgcgacccctatttaccagtggattaataggaagggacaactcaattgca
agacttggaattcatggaatctattggctttacaatgtgaatataccaggttctcttctt
attgatggcacaaataccatatattttacgcaaccaagatgcaccagtcccttccaaggt
atcatgtatgattatattcgtttggaaggcccaccttctgaaggaatttaa
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