Vigna umbellata (ricebean): 124822717
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Entry
124822717 CDS
T09662
Name
(RefSeq) protein HASTY 1 isoform X1
KO
K14289
exportin-5
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124822717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vum03016
]
124822717
03036 Chromosome and associated proteins [BR:
vum03036
]
124822717
Transfer RNA biogenesis [BR:
vum03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
124822717
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
124822717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
124822717
NCBI-ProteinID:
XP_047150714
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MEDSVGNNGVTANNVAQAIHTALDWASTPDARLNAVAFLDSIKRGDVRALANTSFLLVKK
NWSSEIRLHAYKMLQHLVRLRWEELSPAEHKNFANLSLELMSEIADPCENWALKSQTAAL
VAEVVRREDISLWQEMLPSLISLSNKGPIEAELVAMMLRWLPEDITVHNEDLEGDRRRLL
LRGLTQSLSEIFPLLYNLLERHFTAAMNEAGRNQMDIAKQHAATVTATLNAVNAYAEWAP
LSDLAEHGIIHGCGVLLSAPDFRLHASEFFKLVSPRRRPIETSIPKFDQAMNNIFHTLMN
VSREFLYRSGSSPGSIDEGEYEFAEYICESMVSLGSFNLQSIAGDSSLLPLYLEQMLGFF
QHFKFAIHFQSLQFWLVLMRDLMSKPKNSTHSAADSSAVSSTGSGEVENAKKKTLSFVSD
DFCGAILDTSFPRMLKREKILHETAITLGVLELWSEDFECKGTFSLYRSRLLELIRFVSS
YKPLIAATKVSEKIDTVIKGLLLSPAPTQDLPVMESMQLAIEGVVNAVFDGSNDFTKTNA
EVQFALCRTFEGILQRLISLKWTEPALVEVLVHYLDAMGPFLKYFPDAVGSVISKLFELL
TSLPTIIKDTSVHSARHARLQICTSFIRIAKAADKSILPHMKGIADTMACLQRDGCLLQS
EHNLLGEAFLVMASSSGIEQQQEVLKWLLEPLSHQWTQSEWQEKYLSGPQGLVQLCSEAP
VMWSIFHTLTFFERALKRSGLKKGNWNSENSATPNSTPTNPMASHIAWMVTPLLKLLRCI
HSLWSPSISQALPGEVRAAMVMIDFERSGLLGEGNSKLPKGSLTVTDGSKVDINKEGYAE
PNGSDIRNWFKGIRDSGYNVLGLSTTIGDSFFKYLDVHSVSVALMENIPSMEFRHIRQLV
HSTLIPLVKNCPLDMWEIWLEKILHPLFIHAQQALSCSWSSLLQDGRAKVPDVLSVLSGS
DLKVEVMEETILRDLTREICSLLSVIASPPLNNGIPSLEQSGHVSRLDALKSLDSVASCS
MVGFLLKHEGLAIPTLRLCLEAFTWTDGESVTKISSYCSVLVVLAIVTNHAELVEYVSRD
LFTSLIQGLTLESNAITSADLVAICREIFVYLCDRHPAPRQVLLSLPNITPHDLVAFEES
LKKTSSPKEQKQHMRSLLQLATGNKLKALAAQKSVNIITNVSMRQRSSVNAPESKVDDGD
VVGLAAIM
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtgttggcaacaacggcgtgactgccaacaatgtcgcccaagctatacac
accgcgcttgattgggcctctactcccgatgctcgcctaaacgccgtcgcttttctcgat
tccatcaagagaggtgatgtacgggcattagcaaacacatcattccttttggtgaaaaag
aactggtcgtctgaaattcggttacatgcctataaaatgctgcagcatttagtgcgctta
cgttgggaggaattgagccctgcagaacacaagaactttgcaaatctttcccttgagttg
atgtcagagattgcggatccttgtgaaaattgggctctcaaaagccagacagctgccctt
gttgctgaggttgttagaagagaggatattagtttgtggcaagaaatgcttccatctttg
atctctctatccaacaagggtccaatagaagctgagttggttgcaatgatgctgcggtgg
cttcctgaagacattactgttcacaatgaagatttagaaggtgatcggagaaggctactt
ttgcgtgggctaactcaatcgttgagtgaaatttttccactattatacaatttactagaa
agacactttacagctgcaatgaatgaagctggtagaaatcagatggatattgccaaacag
catgctgccactgtaacagctactctaaatgcagtgaatgcgtatgctgaatgggctcca
ttgtcagatttagctgagcacggcattattcacggttgtggtgtgctactatctgctcca
gattttcgtcttcatgcttcggagttcttcaaacttgtctctccaaggaggaggcctatt
gaaacatctatccctaaatttgaccaagccatgaataacatctttcacacgttgatgaat
gtatctagagaatttttgtatagatccggttcaagtcctgggtctatagatgagggtgaa
tacgaatttgctgaatatatatgtgaaagtatggtgtcactgggctcttttaacttgcaa
agtattgctggtgatagcagcttacttccactttacctagaacagatgctgggatttttc
caacatttcaagtttgctattcattttcaatccctgcaattttggctggtactaatgagg
gatttgatgtcaaagccaaaaaattccacacattcagctgctgacagttcagctgttagt
agcacaggttctggagaagttgaaaatgcaaagaagaagactctaagctttgtgagtgat
gatttttgtggtgcaattttggatacatctttccctcgcatgctcaagagagagaaaatt
ctgcatgagactgccattacattaggggtattggagttgtggagcgaagattttgagtgc
aagggaacattcagcctttatcgatctagattgttggagttaattaggtttgtttcttct
tacaaaccccttatagctgctactaaagtatctgaaaagattgatacagtcattaaaggt
ctcttgctctctccagcaccgactcaggacttacctgtgatggaaagtatgcagttggct
atagagggtgttgtaaatgcagtttttgatggatccaatgacttcaccaagacaaatgct
gaagtccagtttgcattatgtagaacgtttgaaggtatacttcaacgcttaatttcctta
aagtggacggagcctgcacttgttgaagtacttgttcactatttggatgctatgggcccc
tttctgaaatatttccctgatgcagttggcagtgttattagtaaattatttgaacttcta
acatctctgccaaccataatcaaggatacatcagtgcatagtgcacgccatgcaaggctg
cagatctgtacatcatttattcggatagcaaaagctgccgacaaaagcattttacctcat
atgaagggcattgctgatacaatggcatgtttgcaaagggacggttgtttgctacagagt
gagcataatcttttaggtgaagcttttcttgttatggcttcttcttctggaattgaacag
caacaagaagttttaaaatggcttttagaacctttgagccatcagtggacacaatctgag
tggcaggaaaaatatctgtcaggtccacaaggtttggttcagttgtgctctgaagcacct
gtaatgtggtcaatttttcataccttgacattctttgaaagggcacttaagaggagtgga
ttgaagaaaggcaattggaattcagaaaacagcgcaacaccaaattcaactccaacaaat
ccaatggcctctcacatagcatggatggtgactcctctcttgaaactacttcgttgtata
cattccctttggtctccatccataagtcaagctttacctggagaggtaagagctgctatg
gtcatgattgattttgagaggtcaggtcttcttggagaagggaactccaaattgccaaag
ggttctttgactgtcacagatggatctaaggtcgacattaataaagaaggatatgcggaa
ccaaatggatcagatatacggaactggtttaaaggcattagagacagtggatataacgta
ttgggcttgtcaacaaccattggcgattcatttttcaaatatttggatgtgcactctgtt
tctgttgcgctgatggagaatataccgtcaatggagttcaggcatattcgacagcttgtt
cattccactttgattcctttggttaaaaactgtcctttggatatgtgggagatttggctg
gagaaaattctacacccattgtttatccatgctcagcaagcccttagctgttcatggtct
agtcttctacaagatggtagagcaaaggttccagatgttcttagcgttcttagtggatca
gacttgaaagtggaagtgatggaggaaacgattttgagggatctcacgcgtgagatttgt
tcactcctctctgtcattgcttctcctccccttaataatggaattccttctttggaacag
tctgggcatgttagtcgattagacgctctgaaaagcttggactcagttgcatcttgttct
atggttggtttccttctaaagcatgaaggtctggccattccaacattacggctatgttta
gaagcttttacatggacggatggtgaatctgtgactaaaatttcttcgtattgctctgtg
ttggtagttcttgcgatagtaacaaatcatgcagaactcgtagaatatgtttctagagat
ctttttacatcccttattcaaggtttaacccttgaatcaaatgcaataaccagtgctgat
ctagttgccatttgtcgtgaaatatttgtatatctttgtgatcgacacccagcacccagg
caggttttgttgtctctccccaatattacccctcacgatttagttgcctttgaggaatct
ttaaagaaaacatccagtccaaaggaacaaaagcaacatatgagaagcttacttcaatta
gcaaccggtaacaaattgaaagcacttgctgcacagaaaagtgtaaatatcattacaaac
gtttcaatgagacagcgcagctcagtcaatgctccggagtccaaagttgatgatggtgat
gttgtggggttggcagccatcatgtga
DBGET
integrated database retrieval system