Vigna umbellata (ricebean): 124823273
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Entry
124823273 CDS
T09662
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vum03036
]
124823273
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124823273
REST complex
124823273
Heterochromatin formation proteins
Other heterochromatin formation proteins
124823273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Orthopox_F6
Motif
Other DBs
NCBI-GeneID:
124823273
NCBI-ProteinID:
XP_047151408
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MKRSRDEVFTSCSQLKRPVVSARGEASGQPQMANGGAQKLTTNDALAYLKAVKDIFQDKR
DKYDDFLEVMKDFKAQRIDTAGVIGRVKELFKGHRDLILGFNTFLPKGYEITLPSEDEQP
APKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAAIFQDH
PDLLDEFTHFLPDASAAASTHYASARNSILRDRSSMPTVRPMHVEKRERTMASHGDRDPS
VDRPDPDQDRGLLRIEKERRRAEKEKERREDRDKREREKDDRDFEHDRERFPHKRSRKVE
DSGAEPLLDADENFGTRPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQEFLKCL
HIYSREIITRQELQSLVGDLLGKYPDLMEGFNEFLLQSEKNDGGFLAGVMNKKSLWNDGH
GLKQMKGEERERERDRDRDRYRDDGMKERDREFRERDKSTVIANKDVLGSKMSLYPSKDK
YLSKPINELDLSNCDQCTPSYRLLPKNYPIPIASQKTELGAEVLNDHWVSVTSGSEDYSF
KHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLDKINNNTIKGDIPIRIEEHL
TAINLRCIERLYGDHGLDVMEVLRKNAPLALPVILTRLKQKQEEWARCRADFSKVWAEIY
SKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPILPN
LEFKYSDLDIHEDLYQLIKYSCGEICTTEHVDKVMKVWTTFLEPMLCVPSRPQGAEDTED
VVKTKNNSVKNGTASVAESDGNPVVGATVMNQKHINVSRNGDGCLPVDQSTSSKAWQSNG
DSGVREDRYLDDRVLHKTETLGNNTQHGKMNNIAFPPNELSGFNNKQDQSSERVVNANAS
PTSGMEQSNGRTNIDNLSGLTATPARPVNASAEGGPDIPPSEGGDSARPGTSTNGVITGG
TKVHRYQEESVRPFKSEREEGELSPNGDFEEDNFAVYGGNGLDAVHKGKDGGISRPYQDR
HGDDVCGETRGENDVDADDEGEESPHRSSEDSENASENVDVSGSESADGEECSREEHEDG
EHDNKAESEGEAEGIADAHDVEGDGMSLPYSERFLLTVKPLAKHVLPMLHEKDRNSGVFY
GNDSFYVLFRLHQTLYERIQSAKINSSSADRKWKASSDTSSTDQYDRFMNALFSLLDGSS
DNTKFEDDCRAIIGIQSYVLFTLDKLIYKLVKQLQAVAADEMDNKLLQLLAYEKSRKPGK
FVDIVYHENARVLLHDENIYRIEYSPGATKLSIQLMDSGHDKPEVTAVSMDPNFSTYLLN
DFLSVVPDKKEKSGIFLKRNKRRYAGSDEFSSQAMEGLQIINGLECKIACSSSKVSYVLD
TEDFLYRVRRKRRVLHPRSSGTHEQAQSSNIRSRRLQRFRNMFSIT
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgaagttttcactagttgttctcaactcaaacgacctgtggtg
tctgcccgaggagaagcgtctgggcaaccgcagatggcaaatggaggtgctcagaaattg
acaactaatgatgccctagcatatcttaaagcagtaaaggatatatttcaagataagagg
gacaagtatgacgactttttggaggttatgaaagatttcaaggctcaaagaattgatacc
gcgggtgtcattggaagagtgaaggaactctttaaaggccatagagatcttatattggga
tttaacaccttcttgcctaaggggtatgaaatcacacttccgtcagaggatgaacaacct
gctccaaagaaacctgttgaatttgaagaagctataaattttgtgaacaaaataaagact
cgttttcaaggcgacgatcatgtgtacaaatcatttcttgacatattgaatatgtacaga
aaggaaaacaagtctatcaccgaggtctaccaggaggttgctgctattttccaggaccat
cctgatcttcttgatgagtttactcattttcttccagacgcttctgcagctgcctctact
cattatgcgtctgcaagaaattctattcttcgtgataggagttcaatgccaacagtacgg
ccaatgcatgttgaaaagcgagaaaggaccatggcttcacatggggatcgtgatcccagt
gttgatcgtcctgatccagatcaggacagaggtttattaaggatagaaaaggagaggaga
cgtgcggagaaggaaaaggaacgcagagaagatagagacaagagagaacgcgaaaaggat
gatagagattttgagcatgatagggagcgatttcctcacaaacgttctcgtaaggttgag
gactctggagctgaaccattgcttgatgctgatgaaaattttggtacgcgtcctatgtca
tccacttgtgatgataaaaattctctgaaaagtatgtacagtcaagagttcgctttctgc
gaaaaagtcaaagaaaaattacgaaatcctgatgactatcaggaatttttgaagtgctta
catatttacagcagggaaataattacccgacaagagttgcagtcattggtgggcgattta
ctgggaaagtatccagatcttatggaggggtttaatgaatttttgctacaatctgaaaaa
aatgatggtggatttcttgctggtgttatgaataaaaagtccttatggaatgatggacat
ggactgaaacaaatgaagggtgaagaaagggaaagagaaagggatcgagatagagaccgt
tatagggatgatgggatgaaagaaagggatcgtgagttccgagaacgggataaatccact
gtgattgccaacaaagatgttttaggttctaagatgtctctatatcccagcaaggataag
tatttatcaaaacctataaatgagctggacctttctaactgcgaccagtgtactcctagt
tatcggctcttaccaaaaaattacccaatacctatagctagccaaaaaacagaacttggt
gctgaagtgttgaatgatcactgggtgtctgtcacttcaggaagtgaggattactccttc
aaacatatgcgcaaaaatcagtatgaagagagcttgtttagatgcgaagatgacaggttt
gaacttgacatgttgttagagtctgtgaatgtgacaaccaaacgagtagaagagctgtta
gacaagatcaataataatacaattaaaggagacatcccaattcgtattgaggagcactta
acagctataaatcttaggtgtattgaacgattatacggtgatcatgggcttgatgtgatg
gaagtgttaaggaagaatgcacctctagctttgccagtgatattaacacgcttgaaacag
aaacaggaagagtgggcaaggtgccgtgctgattttagtaaagtttgggctgaaatatat
tctaagaactatcacaaatctcttgatcatcgtagcttctactttaagcagcaggataca
aaaagccttagcaccaaagccttgctggcagaaatcaaagaaattagtgaaaagaaacgc
aaagaagatgatgttcttcttgctattgctgctggaaacagacggccaattcttccaaac
ttggagtttaagtattctgatctagatattcatgaagatttgtatcagctcataaaatat
tcctgtggagaaatttgcacaaccgaacatgtggataaagttatgaaggtttggacaaca
tttttagagcccatgctttgtgttccttctcggccccagggtgcagaggatacggaagat
gttgtcaagactaagaataatagtgtcaagaatggcactgcgagtgttgctgaaagtgat
ggtaaccctgttgtgggtgctaccgtcatgaatcaaaagcatataaatgtttccagaaat
ggggatggttgtttgccagtagatcaatcaacttctagtaaagcatggcaatcaaatggt
gatagtggggttagagaggataggtatcttgacgaccgtgtattacataaaactgaaact
ttgggaaataatacacagcatggtaaaatgaataatattgctttcccacctaatgaacta
tcaggatttaataataagcaagaccagtctagtgaaagggtagtgaatgctaatgcctcc
cccacatctggaatggaacaaagcaatggaaggacaaacatagataatttgtcaggactc
actgccactccagctagacctgttaatgcatctgctgaaggaggacctgatattccacct
tcagagggtggtgattctgcaagaccaggtacatccacaaatggggtcatcactggaggc
accaaagtccaccggtaccaagaggaatcagttcgacccttcaaaagtgaaagagaagag
ggtgagttatctcctaatggagactttgaagaagataactttgcagtttatggaggtaat
ggtttggatgcagtgcataaaggaaaggatggtggtattagtcggccatatcaagataga
catggggacgatgtttgtggtgaaactagaggagaaaatgatgttgatgctgatgatgaa
ggtgaagaaagtcctcacaggtcatcagaggacagtgaaaatgcatctgaaaatgttgat
gtttctggcagcgagtctgctgatggtgaggagtgttctcgggaagagcatgaggatgga
gaacatgataacaaggctgagagtgaaggtgaagctgaaggaatagctgatgcccatgac
gttgaaggagatggaatgtcattgccgtactctgaacgctttctcctaactgtgaagcca
ctggcaaagcatgttcttccaatgttacatgagaaggacaggaattcaggagttttctat
ggaaacgattccttttatgttctttttagacttcatcagacattgtatgagaggatacaa
tcagcgaagattaactcatcatctgctgataggaaatggaaagcttcgagtgatacaagc
tccactgatcaatatgacagattcatgaatgcccttttcagtttgctggatggttcttct
gataatacaaaatttgaggatgattgtcgagctataattggaattcagtcatatgtctta
ttcacattagacaagctgatatataaactcgttaaacagcttcaagctgttgctgctgat
gagatggataataaacttctacaactacttgcatatgagaagtcaagaaaacctggaaaa
tttgtcgacatagtttatcatgaaaatgcccgtgttcttctccatgatgagaacatatat
cgtattgaatattcacctggagcaacgaaactatctattcaactgatggactctggacat
gataaacccgaagtgactgctgtttcgatggaccctaatttttcaacctatctactcaat
gacttcctgtctgttgtccctgacaaaaaagagaagtcagggattttcttgaaaaggaat
aaacgtagatatgctggtagtgatgaattttcaagccaggctatggaaggactacagatt
attaatggtctggagtgcaagatagcttgcagttcatctaaggtctcttacgttttagat
actgaagactttttgtatcgggtgagaaggaaacgaagagtcttgcatccgaggagttca
ggcacccatgaacaggcacagtcttcaaacattcgttcaagaagactgcaacgattccgc
aacatgttttccattacatga
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