Vigna umbellata (ricebean): 124823338
Help
Entry
124823338 CDS
T09662
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124823338
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124823338
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
Pre-60S particles
Helicases
124823338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Tox-REase-2
Motif
Other DBs
NCBI-GeneID:
124823338
NCBI-ProteinID:
XP_047151486
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDSDFPNKALTSTRFSDLNPPLSDPVLQALSQSGFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVIPLVEILRRSCSHSKPHQVLGIIISPTRELSTQIYNVAQPFISTLVNVKS
ILLVGGAEVKADIKKIEEEGANILIGTPGRLYDIMNRMDVLDFKNFEILILDEADRLLDM
GFQNQITSIISQLPKLRRTGLFSATQTEAIEELSKAGLRNPVRVEVRAETKSENDLVSSE
QPESSKTPSGLHIEYLECEEDKKPSQLIDILIKNRSRKIIIYFMTCACVDYWGTVLPCLS
VLKGFSLIPLHGKMKQSSREKALATFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRIPLHERICSDGALDVVPQIRS
AAKKDRDIMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVKHH
SLSTDGFEPVKDINFEDIKYRDKSREKQRKKNLQAKKEAKEKEPKPQKSKKTPDAVMRKK
TARQRRAQQTIEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEELL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacttcccgaacaaagcgttgacgagcacgcgtttttccgacctaaatccg
cccctttccgaccccgttctccaagccctatcacaatctggcttcgacttctgcacgccg
gtccaagccgccaccattcctttgctctgcagcttcaaagacgttgccgttgacgccgcc
accggttctggaaaaaccctagcctttgtcatccctctcgttgagattctgcgccggtcc
tgctctcattccaagcctcaccaggtgctagggataattatatctcctacaagggagctt
tcaacccaaatatataatgtggcacaaccattcatttcgacattggtgaatgttaagtcc
atactcctcgttggtggagcggaagtaaaagcagacataaagaaaatagaggaggaagga
gcaaacatattgatcggcacgcctgggcggttatatgacataatgaatcggatggatgtc
ttggattttaaaaacttcgagattttgattttggatgaggctgatagactcctagatatg
ggattccagaaccagataacttctattatatctcaattgcctaagcttcgtagaactggt
ctattttctgctactcaaactgaggctattgaagagctttctaaggcaggactgagaaac
cctgtgagggttgaagttcgagcagaaactaaatcagaaaatgatcttgtgtcatcagaa
cagccagaatcttcaaaaacaccttcaggacttcacattgagtacttggaatgcgaggaa
gataagaagccatcacagctaatagatattcttattaaaaaccgctcaagaaaaattata
atatatttcatgacttgtgcttgcgttgattattggggaactgtccttccttgtctttct
gttttgaaaggtttctccttgattcccctacatggaaagatgaagcagtcttcaagggag
aaagcactggctacatttacatccctttcaaatggaattctgctatgtacggatgttgct
gcgcgaggactagacataccaggcgttgattgtatagtgcagtatgatccccctcaagat
ccaaatgtttttgtacatagagtcggtcgaactgctcggctgggaaaacagggtcatgct
gttgtcttcttattaccaaaggaggaatcttatgtagaattcttgcgtataagaagaatc
cctctccatgagagaatatgttctgatggtgcattggatgttgttcctcagattcgttct
gctgcaaaaaaagatcgtgatatcatggagaaaggaattaaggcttttgtctcttacatc
cgtgcttataaagagcatcactgctcttatatttttaggtggaaagaacttgaaattggc
aaattggccatgggatatggcttattacaacttccttcaatgccagaggtaaaacatcac
tcactttccactgacggatttgaaccagttaaagatatcaatttcgaggacattaagtac
agggataaatcacgggagaaacaaagaaagaagaacctacaagcaaagaaagaagccaaa
gagaaagaaccaaaacctcaaaaatcaaagaaaaccccagatgctgtcatgcggaagaaa
acagctcgacagagacgtgctcagcagacaatagaagacgaggaggagttgatgcaagaa
taccgcttgttgaagaaattgaagaaagggaccatagacgagaatgaatatgccaagttg
acaggcactgaggaattactttga
DBGET
integrated database retrieval system
