Vigna umbellata (ricebean): 124823362
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Entry
124823362 CDS
T09662
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04142
Lysosome
vum04144
Endocytosis
vum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124823362
04142 Lysosome
124823362
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124823362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124823362
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vum04147
]
124823362
Membrane trafficking [BR:
vum04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124823362
Exosome [BR:
vum04147
]
Exosomal proteins
Proteins found in most exosomes
124823362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
124823362
NCBI-ProteinID:
XP_047151509
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MAAANAPIAMKEALTLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIVDMNMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSVLISFATKTLNAGQIIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAALYVRALQHYTELSDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGIDACIKIFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDADLWDKVLNPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGDMAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDTTQFLDVIRAAEDANVYHDLVRYLLMVRQKTKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACIDAEEFLLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHEFLEMRHVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADIAIELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQNQVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGFAPPPPM
GGLGMPPMPPFGMPPMGSSY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctaacgctccgatcgccatgaaagaagctctcactttgccgagcattggc
ataaatccgcagttcatcacgttcacgcatgtgacaatggagtccgataagtatatatgc
gttcgagaaacggctccgcagaatagcgtggttatcgttgatatgaacatgccgaatcag
cctttgaggaggcctattactgcagattccgctcttatgaatcccaattccagaatcctt
gccttgaaagctcaactccaaggaacaactcaagatcacctacaaatttttaatattgaa
atgaaagcgaagatgaaatcgtatcagatgcccgagcaggtggtcttttggaaatggatt
acccccaagttgttgggtcttgtgacacaaacctctgtataccattggtcaattgaaggt
gactcagaacctgtcaagatgtttgagagaacagcgaatttagcaaacaatcaaataatt
aattatcgatgtgatccttcagaaaaatggttggtcttgattggtattgctccaggttcc
cctgagaggcaacaattggttaaaggaaacatgcagctcttctctgtggatcaacaacga
agccaggctcttgaagcgcatgctgcatcatttgctcaatttaaagttcctgggaatgaa
aatccttctgttttgatttcttttgccactaagacacttaatgctggtcaaattatatcc
aagttgcatgttattgagctgggtgctcagccagggaagccatcgtttacaaagaaacaa
gctgaccttttctttcccccagattttgctgatgattttccagttgccatgcagatatcc
cacaaatacagtttgatttatgtgattacgaaacttggtctcctatttgtctatgatttg
gagactgctactgctgtatataggaacagaattagtcctgatcctatatttttgacatca
gaagctacatcagttggaggcttttatgctattaacaggagaggccaggtgttattggct
actgttaatgagcaaacgattgtgaattttgtcagtggtcaactaaacaatttggagcta
gcggttaatcttgccaagcgaggaaatcttcctggtgctgagaaattggtggttgaacga
ttccatgaactgtttgcccaaacaaagtataaagaagcagctgagcttgcagctgaatct
ccacaaggaatccttcgcactcctgatacagttgcaaaatttcagagtgttcctgtgcaa
gcagggcaaactcctccactattgcagtattttggaacacttttgacaagaggaaagctg
aatgcctttgagtcattagaattgtcaaggctggtagtaaaccagaacaagaaaaacctt
ttggagaattggttggcagaggacaagcttgaatgcagtgaggaactaggagatcttgta
aagactgtggataatgatcttgctttaaaaatatacatcaaagccagagctactccaaaa
gttgttgctgcttttgctgagagaagggaatttgacaagattctaatatactctaagcag
gttggctacacacctgactatctcttccttttgcaaacaattctccgatcagatcctcag
ggtgctgttaattttgcattaatgatgtcgcaaatggagggaggttgcccagttgattat
aacaccataactgatttatttcttcagagaaatctgatccgtgaggcaactgcctttctc
ctagatgttctgaaaccaaatctaccagaacatgggttccttcaaactaaggtgttggag
ataaatctggttactttccctaatgttgcagatgcaattttggctaatggcatgttcagt
cattatgaccgtcctcgtattgcccaactttgtgaaaaagctgctctttatgtacgagct
ttgcaacattacacagagttgtcagatataaaacgtgtgattgtaaatacacatgcaatt
gaaccacagtcacttgttgaattttttggcactctatcacgagaatgggcattagagtgc
atgaaagacttattgctagtcaatcttagaggcaacctacagattattgtgcaggttgcc
aaagaatattgtgaacagttgggcattgatgcctgcataaagatttttgagcaattcagg
tcatatgaagggttgtattttttcctgggatcatatttgagctccagtgaggatcctgac
attcactttaagtacattgaggcagcagcaaagactggacaaatcaaagaggttgagcgt
gtgactagagaatcaagtttctatgatgctgagaaaacaaagaactttctaatggaggct
aagcttcccgatgcacgacctctgattaatgtttgtgaccgatttggatttgttccagat
ctaacacactatctatacacaagcaacatgcttcgctacattgaaggttatgttcagaag
gtgaacccagggaatgctcctttagtcgttgggcagcttttagatgacgagtgtccagaa
gattttatcaaaggcttgattctctctgttcgttccttactgccggtggagccccttgtg
gaggagtgtgagaagaggaatcggcttcgtttgctcacacagtttttggaacatcttgta
agcgagggaagccaggatgtacatgttcacaatgcactgggtaaaatcatcattgatagc
aacaataatccggaacattttctcactaccaacccatactatgattctcgagttgtgggc
aaatattgtgagaaacgtgatcccaccttagcagttgtagcttataggcgtggacaatgt
gatgatgaacttatcaatgtgacaaacaaaaattctttgtttaaactacaagcaagatat
gttgttgagcggatggatgctgatctttgggacaaagttcttaaccctgataatgcctac
agaaggcaacttattgatcaggttgtatctacagctctgcctgaaagcaagagccctgaa
caagtatctgctgctgttaaggctttcatgacagctgatctacctcatgaattgatcgag
cttcttgagaagattgtccttcagaattctgcattcagtggcaattttaatctgcagaat
ctacttattttaacagcaataaaggctgatccatccagagttatggattatattaataga
ctggataattttgatgggcctgcagtgggagatatggctgttgaggctcaattatatgag
gaagcatttgcaattttcaagaagttcaacttaaatgtccaggcagtcaatgtcttgtta
gacaatattcatagcattgatagagctgtggagtttgctttccgagttgaagaagatgct
gtttggagtcaggtggccaaagctcaactaagggaaggactagtaagtgatgccattgag
tcctttatacgagcagacgatactacacaatttttggatgttatccgtgctgctgaagat
gccaatgtttaccatgacctggtgagatacttgctgatggttcggcagaagactaaagag
cccaaggtggacagtgagctcatttatgcatatgcaaagattgataggctcagtgacatt
gaggagttcattcttatgccaaatgtagccaatcttcaaaatgttggtgaccgattgtat
gatgaagaactatatgaagctgccaaaatcatatttgcctttatatctaactgggccaag
ttagcagttacacttgtgaagttgaaacagttccaaggtgcagttgatgcagcaaggaaa
gctaacagtgcaaaaacatggaaggaagtttgctttgcctgtattgatgcagaggagttc
cttttggcccaaatatgtgggcttaacattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttgcttcaacgaactaatatccctcatggagagtggt
ttaggtttagaacgggcacatatgggtatcttcactgagttgggagttctatatgctaga
tatcgtcctgagaagcttatggaacatatcaaactatttgcaacccggctcaacattcca
aagcttataagagcttgtgacgaacaacaacattggaaggagctgacctatttgtacatt
caatatgacgagtttgataatgctgcaacaaccatcatgaaccattcacctgaagcatgg
gaccatatgcaattcaaagatgttgtcgtcaaagttgctaatgttgagttgtattacaag
gccgttcatttctatttacaagaacatcctgatcttatcaatgatgttctgaatgtcctt
gctcttcgtgttgatcatgcacgtgttgttgacatcatgcgaaaggctggtcatctccgt
cttgtcaagccatacatggttgcagttcagagtaacaatgtgtctgctgttaatgaagcc
ctgaatgaaatatatgtcgaggaggaagactatgatagattgcgcgagtcaattgatttg
catgataactttgaccaaataggccttgcacaaaagattgaaaagcatgagtttcttgag
atgaggcatgttgctgcttacatttacaagaaggcaggtagatggaagcagtccattgca
ttgtctaaaaaggataacctttacaaagatgccatggagacagcttcacaatctggtgac
cgtgaacttgctgaggagttgcttgtttatttcattgatcagggaaagaaagaatgcttt
gcctcgtgtctatttgtttgctatgatttgatccgggcagacattgctatcgagttggcc
tggatgaacaacatgattgactttgccttcccatatctcttgcagtttatccgcgagtac
actggcaaagttgatgaactggtgaaggacaagattgaagctcagaaccaagtgaaggct
aaagagcaagaagagaaggaagtaattgcacaacagaatatgtatgctcagttgttgcct
cttgctttgcccgcaccaccaatgcctggaatgggaggctttgcccctccccctccaatg
ggtggattggggatgcctccaatgcctcctttcggtatgccacccatgggcagcagctac
tga
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integrated database retrieval system
