KEGG   Vigna umbellata (ricebean): 124823403
Entry
124823403         CDS       T09662                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03082  ATP-dependent chromatin remodeling
vum03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124823403
   03083 Polycomb repressive complex
    124823403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vum03036]
    124823403
Chromosome and associated proteins [BR:vum03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     124823403
  Histone modification proteins
   HAT complexes
    HATB complex
     124823403
   HDAC complexes
    Sin3A-HDAC complex
     124823403
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     124823403
    PRC2.2
     124823403
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     124823403
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    124823403
  Chromatin remodeling factors
   NuRD complex
    124823403
   NuRF complex
    124823403
   NuRF complex (fruit fly)
    124823403
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD_LRWD1 eIF2A MIOS_WD40 Beta-prop_RIG_1st Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st Phage_CRI
Other DBs
NCBI-GeneID: 124823403
NCBI-ProteinID: XP_047151548
LinkDB
Position
Unknown
AA seq 425 aa
MGKEEEEMRGEIEERLINEEYKIWKKNSPFLYDLVITHALEWPSLTVEWLPDRHEPAGKD
YSLQKVILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRPDIGGFGCANGKVQIIQ
QINHEGEVNRARYMPQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPAVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISAPLHIFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQSPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAAAS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggggaaagaggaggaagagatgaggggtgagattgaggagcgactgatcaacgaggag
tacaagatatggaagaagaatagtccttttctgtatgatctggtgattacgcatgcgctt
gagtggccttccctcaccgtggagtggcttcccgaccgccatgaaccagccggcaaagat
tactcgctgcagaaggttatattgggcacccatacctctgagaatgagcccaattacctc
atgttggcccaggtccaacttccccttgacgatgctgagaacgatgcccgtcactacgac
gacgatcgccccgacatcggcggctttggctgtgccaatggcaaagttcagatcatccag
cagatcaaccatgagggtgaggttaacagggctcgctacatgccccagaaccccttcatc
attgccaccaagactgttagtgccgaagtttatgtctttgactacagcaagcacccctct
aagccccctcttgatggggcctgtaaccctgatttgaggctcaggggtcacaacactgag
ggttatggcttgtcctggagtaagttcaagcaggggcacttgcttagtggttctgatgat
gctcagatttgtttgtgggatattaatgccactcccaagaataagaccctcgaggcaatg
cagatatttaaggtacatgaaggtgttgtcgaagatgtggcttggcatttgaggcatgag
tacttattcggttctgtgggtgatgatcaatacttgcttatatgggaccttcgaacgccg
gctgtcaccaagcctgtccaatctgtggttgcccatcaaagtgaggttaactgcttggcc
ttcaatccttttaacgaatgggttgttgctactggttctacggataaaactgtgaagttg
tttgatctgcggaagatcagcgctcctctgcacatcttcgattctcacaaggaggaggtt
ttccaggttggatggaatccaaagaatgaaactatcttggcttcttgttgtctgggtagg
aggctcatggtgtgggatcttagcaggattgacgaagagcagtcaccagaagacgcggaa
gatggtccaccagaattgctctttattcatggtggtcatacaagcaaaatatctgacttt
tcctggaatccatgtgaagattgggttgttgctagtgtcgctgaagacaacatacttcaa
atatggcagatggcagagaacatataccacgacgaagatgatctgccagaagagtcaacg
aaagccgcagcttcgtaa

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