Vigna umbellata (ricebean): 124823598
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Entry
124823598 CDS
T09662
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124823598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vum03036
]
124823598
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
124823598
SWR1 complex
124823598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
124823598
NCBI-ProteinID:
XP_047151796
LinkDB
All DBs
Position
Unknown
AA seq
2029 aa
AA seq
DB search
MASKGPRSKIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KKVALRASKGMIDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLVDAHKSGENNSAEHHMSIQRKDAHGDVINEP
KEADVVEYQSDAADNDDEYDVQSDDESEDDEQTIEQDEAFITKEERQEELEALQNEMDLP
IEELLKRYAGEKGESVMKESSPEHSEDVEKIVGTTGDGKKILASENGDDHLSVSKNGTNN
SSMVSGRRCDESNGDMATPTKNLSQYEEGQSENLKEVPSETANEDFSYDFTDEEEDGDFL
LGTEDKDDETTLSEEEKLERVDAIDPKDEIALLQKESDMPVEELLARYKRDPSDNEDGGY
ETDYASALSEDHSDSPVHEDAEQKDSAIPMDEDIKSGEHLATTQSQTEEHWESPHENLDQ
RESEHIIADAAAAARSAQPTGNTFSTTNVRTKFPFLLKYSLREYQHIGLDWLVTMYEKRL
NGILADEMGLGKTIMTISLLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILT
YFGSAKERKFKRQGWLKPNSFHICITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQ
RWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFSNPISGMVEG
EEKINKEVVDRLHNVLRPFLLRRLKRDVEKQLPMKHEHVIYCRLSKRQRNLYEDFIASSE
TQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIVSSFDICGIDVQLSSSVCSMLLPSP
FSVVDLRGLGLLFTDLDYSMTAWESDEVRAIETPGTSIMERTDIDELEVIRPLNCQKKLQ
GTNIFEDIQRKIWEERLKQAKERATAIAWWNSLRCKKRPMYSTTLRNLVTLRHPVYDIHL
VKANPTSYMYSTKLADIVLSPIERFQKMTDVVESFMFAIPAARAPSPVCWCSKSETNVFL
QPSYKQKCSEVLLPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELANLLRKLKSEGHRA
LIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKYFLFILSTRSGG
VGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQ
KRALDNLVIQSGSYNTEFFKKLDPMELFSGHRTLSIKNMLKEKNQNNGEVSVTNADVEAA
LKCVEDEADYMALKKVELEEAVDNQEFTEEAIGRLEEDEYVNEDDETAELGESVSNLNKE
NALVLNGSDQKEDRPPNSVVVKEDDADVLADVKQMAAAAAAAGQAISAFENELRPIDRYA
IRFLELWDPIIDKTALESEVRIEDTEWELDRIEKYKEEMEAEIDEDEEPLVYESWDADFA
TMAYRQQVEALAQHQLMEELEYEARLKEAEEEACDSKKTTPGDLKPKPKKKPKKAKFKSL
KKGSLTSGLKPVKEESQAEPMNIDDEDITGLEFVSPNSSMQKKRKSKATTDGEEKRLKKS
KKSKRDPPDIYASDLESNALVVQYEHAESKTSESLVDLEQKTAGRGKMGGKISITPMPVK
RIWTIKPEKMRKGNHWSKDCIPSADFWLAQEDAILCAVVHEYGPNWSLVSDILNSMTAGG
SYRGRYRHPVHCCERFRELFQNNVLSMDNANNEKAITPGSGKALLKVTEDNIRMLLDVAS
EQANRELLLQKHFFALLSSAWKVASHVDHRKNPSPTCNGLYFDQSLFTSIGQPSQNSLKK
SSERVPFANLVQSKKLVAAALDDSTTGQVNDRVILPNQGEGLPMSADRLDITLEFPKEES
DVLALFPSVINLSIHGTDPTPSLSKQTGEDGFKIGLFMAENRFREATRIFEEDVSGWASS
AFPTSDARSRPGSRIQSSGKQKSSISDSAKPSRSKSKRASIDVSEMHHHQADSIVQSVPS
LKDLRFDLTSFTTDEIGLTAVDTCFPFDLNVESSWEREVLEYPTDYVTG
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaggtcccaggtctaagattgatcatgagagcagagccaaacggcaaaag
gctcttgaagctccaagggagcctcgcagaccgaaaactcattgggaccatgtcttagaa
gaaatggtgtggttatcaaaggattttgaatcagagaggaaatggaaattagctcaggca
aagaaagtagctttaagagccagcaaaggcatgatagatcaggctacaaggggtgaaaag
aagatgaaggaagaagaacagcgattaagaaaggttgcactaaatatttctaaggatgtt
aagaaattctggacaaaaatagaaaagctggttctttacaaacatcaaatggaacttgat
gaaaagaagaaaaaggcacttgacaaacagcttgagtttttattagggcaaacagagagg
tactcaacaatgctggcggaaaatcttgtggatgctcataaatcaggagagaataattct
gcagagcatcacatgagtattcaacgcaaagatgcgcatggagatgttattaatgaacct
aaagaagctgatgttgtggagtatcaatcagatgctgccgacaatgatgatgaatatgat
gtacaatctgatgatgaatcggaggacgacgagcaaacaattgagcaagatgaggctttt
attactaaagaagagagacaagaggaattggaagctttgcaaaatgaaatggatcttcct
attgaggagttactcaagcgttatgcaggggagaaaggagaatctgtgatgaaagaaagt
agtccagagcatagtgaagatgttgagaaaatagtaggaacaactggtgatggtaagaaa
atattagcatcagaaaatggtgatgatcatttatctgttagcaaaaatggtacaaacaac
tccagtatggtctctggtcgacgttgtgatgaaagcaatggtgatatggctacaccaaca
aaaaatctatctcaatatgaggaaggtcaatctgaaaatctaaaagaggttcccagtgag
acagccaatgaagatttttcgtatgattttactgatgaagaggaagatggtgactttttg
cttggcacagaagacaaggatgatgaaacaaccttatcagaggaggaaaaactggaaaga
gttgatgcaatagatcccaaggatgagattgcattattacaaaaagagagtgacatgcct
gttgaggaactgcttgcaaggtataaaagggacccgagtgacaacgaagatgggggatat
gaaactgattatgcttctgctttatccgaagaccattcagactctcctgtccatgaagat
gctgagcaaaaggattctgccattcctatggatgaagatataaagtctggtgaacacctg
gctaccacacagtcccagacagaagaacattgggaatcacctcatgaaaatttggatcaa
agagaaagtgagcatataattgctgatgcagctgctgctgcaagatcagcacaacctact
ggaaacaccttctccacaactaatgtgcgtacaaagttcccttttcttctcaagtactct
cttcgtgagtatcaacatattggattggattggcttgtcaccatgtatgaaaaaagactg
aatggaattttggcagatgaaatgggtcttggaaaaacaattatgactatatctttgctt
gcacatcttgcttgtgaaaaggggatttggggtccgcatttaattgtggtaccaactagt
gtaatgcttaactgggagaccgaatttttgaaatggtgtcctgcctttaaaatattgact
tattttggaagtgccaaggagcgaaaatttaaaaggcaaggatggttgaaaccaaactca
tttcatatatgcataactacttatagattagttattcaggactccaaagttttcaagcgc
aaaaagtggaaatatctgatcttagatgaagctcatctcattaaaaactggaagtcacaa
aggtggcagacactcttgaatttcaattcaaaaaggcggattctcttgactgggacacca
ctacagaacgatctcatggaactgtggtctctcatgcatttcttaatgccccatgttttc
cagtcacatcaagagtttaaggattggtttagtaatcctatatcagggatggtagaggga
gaagaaaaaattaataaggaggttgttgaccgcctgcacaatgtccttcgtcccttttta
ctccgtcgactaaagagagatgtggaaaaacaacttccaatgaagcatgaacatgtcata
tattgtagactatcaaagaggcagcggaatttgtatgaggatttcattgctagctcagag
actcaagcaactcttgcaagtgccaatttttttgggatgattagtattatcatgcaactt
cgtaaagtttgcaatcatcctgatctatttgagggtcgtcctattgtcagttcgtttgat
atttgtggtattgatgttcagttaagttcttctgtttgctctatgcttttgcctagcccc
ttttcagtggtggacctaagaggtttgggtcttttatttactgatcttgactatagtatg
actgcatgggaaagtgatgaagttcgagctattgagacccctggaacctcaatcatggag
cgtactgatatagatgagctagaagttattaggccactaaattgtcaaaaaaagttgcaa
ggaacaaacatttttgaagacatccaaaggaaaatctgggaagagaggctaaaacaggca
aaggaacgtgcaacagctattgcatggtggaactccttgagatgtaaaaagagacctatg
tactcaacaactctgaggaatcttgttaccttaaggcatcctgtatatgacattcatctg
gtgaaagcaaatcctacttcatatatgtactcaacaaagctggctgacattgttctctcc
cccattgaacgatttcaaaagatgactgatgtggttgaaagcttcatgtttgcaattcca
gctgcacgggcaccctctcctgtttgctggtgcagtaaaagcgagacaaatgtgtttctg
cagccatcttacaagcagaaatgctctgaagttttgttgccgctactgtcaccaatccga
ccagcaattgttcgccgacaagtgtatttccctgataggcgtcttatacaatttgactgt
gggaaactgcaggaactggcaaatttgttgagaaaattaaaatcagaaggccaccgagct
ctgatattcacccagatgacaaagatgcttgacatattagaggcattcattaacttatat
ggctatacatacatgcgcttggatggatcaacccaaccagaggagagacagaccttaatg
caacgctttaacacaaaccccaaatattttcttttcatcttgtcaacccgtagtgggggt
gttggtatcaatctagttggagctgacacagttattttttatgatagtgactggaatcct
gctatggatcaacaggcacaagatcgatgccatagaattggtcagacacgtgaagttcat
atttatagattgataagtgaaagcaccattgaggagaatattttgaagaaagcaaatcag
aagcgtgcacttgataatctagttatacaaagtgggagttataatactgagttcttcaag
aagcttgatcctatggaactattttcaggccatagaacactttcaataaaaaatatgctg
aaggagaaaaaccagaacaatggggaagtttctgtaacgaatgcagatgtagaggctgca
ctgaaatgtgttgaagatgaggcagattacatggctttgaagaaagttgaactggaagag
gctgtggacaaccaggagtttaccgaagaagccattgggagacttgaagaggatgaatat
gtaaatgaagatgatgaaactgcagaattaggtgaatctgtttcaaacttaaataaagag
aatgccttggtgttaaatggaagtgatcagaaggaagatagaccaccaaactctgttgtt
gtcaaagaagatgatgctgatgtgctggctgatgtcaaacagatggctgcagctgcagct
gcagctggacaagctatctcagcatttgaaaatgagctacgccctattgatcgatatgcc
attcgctttctggaactgtgggatccaattatagataaaacagctttggaatctgaagtc
aggattgaggacacggaatgggagttggatcggattgaaaagtacaaggaggagatggag
gctgaaattgatgaagacgaggaacctcttgtatatgaaagctgggatgctgattttgca
acaatggcatatcgacagcaagtagaggccttggctcaacatcagttgatggaggaactt
gaatatgaagctagactgaaagaagctgaggaagaagcttgtgattctaaaaagacaaca
ccaggggatttgaagcccaaacctaaaaagaaacctaagaaggcaaagttcaaatctcta
aagaaaggatctttaacttctggattgaaacctgtgaaagaagagtcacaagcagagcca
atgaacattgatgatgaggatatcactggtctggaatttgtgtctccaaattcatccatg
cagaaaaaacgtaaatctaaagcaacgactgatggtgaagaaaagagacttaagaagtcc
aaaaagtccaagagggatcctcctgacatttatgcgtctgatttagaatccaatgctttg
gttgtgcaatatgaacatgcagaatcaaaaactagtgaaagtctggttgatttggaacag
aaaacagcaggcaggggtaagatgggaggaaaaatatccatcactcctatgcctgtaaaa
cggatctggacgataaagccagaaaaaatgagaaagggaaatcattggtccaaagattgt
attccatcagctgatttttggctggctcaggaggatgctatattatgcgctgttgttcat
gaatatggtcctaactggagtttggttagcgatattcttaatagcatgactgctggtggg
tcatacagggggagatatcgacatcctgtccattgctgtgagcggtttagagaactattc
cagaataatgtattgtcaatggacaatgcaaataatgagaaggccatcactcctggctct
ggaaaggctcttcttaaagttacagaggataacatacggatgctgttagatgttgcttct
gagcaggcaaatagggagttgctgctgcagaagcacttttttgcattgctttcatctgcc
tggaaggtggcatcacatgtcgaccacaggaaaaatccatcacccacctgtaatggtctc
tattttgatcagagtctttttacttccataggccagccttcgcaaaattccttgaagaaa
tcctctgaaagggtgccatttgcaaatctggtccagagtaagaagttagtagcagctgca
cttgatgattccacaactgggcaagtgaatgatagagtcatcctccctaaccaaggggaa
ggcttgccaatgagtgctgataggttggatattactctggaattcccaaaagaggagagt
gatgtcttagctttgtttccatccgttataaacttatcaatacatgggactgatccaaca
ccatctttaagtaagcaaacaggagaagatggctttaaaattggtctgtttatggcagag
aatcgtttcagggaggcaacaagaatttttgaagaagacgtctctggatgggcatcatct
gcattcccaaccagcgatgcaaggtctcgacctggatccaggatacaatcctctggaaag
cagaagtcttccatatctgactctgctaagccttctaggtcaaagtctaaaagagcttca
attgatgtcagtgaaatgcatcaccatcaggctgactcgatagtccagtcggtgccatca
cttaaggatctgagatttgatctcacttcattcactacagatgaaattggacttactgct
gtggacacatgtttcccctttgacttgaatgtggaaagttcatgggaaagggaggttttg
gaatatcccacagattatgttactggttaa
DBGET
integrated database retrieval system
