Vigna umbellata (ricebean): 124823643
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Entry
124823643 CDS
T09662
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124823643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124823643
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124823643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Utp13
Beta-prop_WDR3_2nd
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_HPS5
KNTC1_N
Beta-prop_SPT8
PEP5_VPS11_N
UTP15_C
Beta-prop_NWD2_C
Beta-prop_WDR75_2nd
WD40_like
Ge1_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
124823643
NCBI-ProteinID:
XP_047151854
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSCSYVLSGHTEIVLCLDTCVSTSGRTFIVTGSKDNSVRLWESESANCIGVGIGHMGAVG
AVAFSKRKRDFFVSGSSDHTLKVWSMDGLSDNTTVPINLKAKAVVAAHDKDINSVAVAPN
DSLVCSGSQDRTACVWRLPDLVSVVVFKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAI
SDGSCLKTFEGHTSSVLRALFVTRGTQIVSCGADGLVKLWTVKTNECVATYDHHEDKVWA
LAVGKKTEMLATGGGDAVVNLWFDSTAADKEEAFRKEEEGVLKGQELDNAVSDADYTKAI
QIAFELRRPHRLFELFSELCSRKREAEEHLDRALKGLGDEELRTLFNYVREWNTKPKLCY
VSQFVLFRVFSVFPPTHIVEIKGIGEVLEGLIPYSQRHFGRIDRLVRSTFLLDFILSGMS
VIEPEAQPTESKTKLLLQSDIHIPDTENVIEERDDTPEITASKKRKSKRSRHGSHKKVKN
VAFNRVESIPLQA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgttcatatgtcttatctggtcacactgaaattgttctatgccttgacacctgt
gtatcaacttctgggagaacattcattgtaactggaagtaaagacaacagtgttaggttg
tgggagtcagaaagtgcaaactgcattggagttggtataggtcatatgggagctgttgga
gccgtcgccttttccaaaagaaagcgagatttctttgttagtggcagtagtgatcatact
cttaaagtgtggagtatggatggcctctcagacaatacgacagtgcctattaatttaaaa
gcaaaagctgttgttgcagctcatgataaagatatcaattctgtagcagttgctccaaat
gatagtttagtgtgtagtggttctcaggatcgtacagcttgtgtttggagacttccagat
cttgtatcggttgttgtgtttaaagggcataaaaggggaatttggtcagtagaattttct
cctgtcgatcagtgtgttgtaacagcatctggtgacaagacaataaggatatgggctata
tctgatggctcctgtttgaagacatttgaaggacacacttcaagtgtgttaagagcattg
tttgttacccgtggaacacaaattgtttcctgtggtgctgatggtttagtaaagctgtgg
actgtaaaaaccaatgaatgtgttgctacttatgatcatcatgaagataaggtttgggcc
ttggctgtaggcaaaaaaacagaaatgcttgcaactggtggtggtgatgctgttgtcaat
ttatggtttgattccactgcagctgacaaagaagaagctttccgtaaagaggaagaagga
gttctgaaaggtcaagagctagataatgctgtctcagatgctgactatacgaaagcaatc
caaattgcatttgaactgcgcaggccacataggctttttgagttattttccgagctttgc
agcaggaagagagaggctgaagagcatcttgacagagcactcaagggcttgggtgatgaa
gagcttcgcacattatttaactatgttcgagaatggaatacaaaaccaaaactctgttat
gtttcacagtttgtacttttcagagttttcagcgtctttcctccaactcatattgttgag
attaaagggattggtgaagttcttgaaggtcttatcccttatagtcagaggcactttggc
aggatagacagacttgttagaagtacatttttgttagatttcattctatcaggaatgtca
gttattgaaccagaagctcaaccgacagaatcaaagaccaagttactgttgcagtccgat
atccatattccggacacagaaaatgtcatcgaggagagagatgacactcctgaaattacc
gcttcaaagaaaaggaaatcaaaaagatcaagacatggttcacataagaaagttaagaat
gtagctttcaatagggtcgagtctataccactacaggcatag
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