KEGG   Vigna umbellata (ricebean): 124823643
Entry
124823643         CDS       T09662                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124823643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vum03009]
    124823643
Ribosome biogenesis [BR:vum03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    124823643
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Utp13 Beta-prop_WDR3_2nd Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_HPS5 KNTC1_N Beta-prop_SPT8 PEP5_VPS11_N UTP15_C Beta-prop_NWD2_C Beta-prop_WDR75_2nd WD40_like Ge1_WD40 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 124823643
NCBI-ProteinID: XP_047151854
LinkDB
Position
Unknown
AA seq 493 aa
MSCSYVLSGHTEIVLCLDTCVSTSGRTFIVTGSKDNSVRLWESESANCIGVGIGHMGAVG
AVAFSKRKRDFFVSGSSDHTLKVWSMDGLSDNTTVPINLKAKAVVAAHDKDINSVAVAPN
DSLVCSGSQDRTACVWRLPDLVSVVVFKGHKRGIWSVEFSPVDQCVVTASGDKTIRIWAI
SDGSCLKTFEGHTSSVLRALFVTRGTQIVSCGADGLVKLWTVKTNECVATYDHHEDKVWA
LAVGKKTEMLATGGGDAVVNLWFDSTAADKEEAFRKEEEGVLKGQELDNAVSDADYTKAI
QIAFELRRPHRLFELFSELCSRKREAEEHLDRALKGLGDEELRTLFNYVREWNTKPKLCY
VSQFVLFRVFSVFPPTHIVEIKGIGEVLEGLIPYSQRHFGRIDRLVRSTFLLDFILSGMS
VIEPEAQPTESKTKLLLQSDIHIPDTENVIEERDDTPEITASKKRKSKRSRHGSHKKVKN
VAFNRVESIPLQA
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcatgttcatatgtcttatctggtcacactgaaattgttctatgccttgacacctgt
gtatcaacttctgggagaacattcattgtaactggaagtaaagacaacagtgttaggttg
tgggagtcagaaagtgcaaactgcattggagttggtataggtcatatgggagctgttgga
gccgtcgccttttccaaaagaaagcgagatttctttgttagtggcagtagtgatcatact
cttaaagtgtggagtatggatggcctctcagacaatacgacagtgcctattaatttaaaa
gcaaaagctgttgttgcagctcatgataaagatatcaattctgtagcagttgctccaaat
gatagtttagtgtgtagtggttctcaggatcgtacagcttgtgtttggagacttccagat
cttgtatcggttgttgtgtttaaagggcataaaaggggaatttggtcagtagaattttct
cctgtcgatcagtgtgttgtaacagcatctggtgacaagacaataaggatatgggctata
tctgatggctcctgtttgaagacatttgaaggacacacttcaagtgtgttaagagcattg
tttgttacccgtggaacacaaattgtttcctgtggtgctgatggtttagtaaagctgtgg
actgtaaaaaccaatgaatgtgttgctacttatgatcatcatgaagataaggtttgggcc
ttggctgtaggcaaaaaaacagaaatgcttgcaactggtggtggtgatgctgttgtcaat
ttatggtttgattccactgcagctgacaaagaagaagctttccgtaaagaggaagaagga
gttctgaaaggtcaagagctagataatgctgtctcagatgctgactatacgaaagcaatc
caaattgcatttgaactgcgcaggccacataggctttttgagttattttccgagctttgc
agcaggaagagagaggctgaagagcatcttgacagagcactcaagggcttgggtgatgaa
gagcttcgcacattatttaactatgttcgagaatggaatacaaaaccaaaactctgttat
gtttcacagtttgtacttttcagagttttcagcgtctttcctccaactcatattgttgag
attaaagggattggtgaagttcttgaaggtcttatcccttatagtcagaggcactttggc
aggatagacagacttgttagaagtacatttttgttagatttcattctatcaggaatgtca
gttattgaaccagaagctcaaccgacagaatcaaagaccaagttactgttgcagtccgat
atccatattccggacacagaaaatgtcatcgaggagagagatgacactcctgaaattacc
gcttcaaagaaaaggaaatcaaaaagatcaagacatggttcacataagaaagttaagaat
gtagctttcaatagggtcgagtctataccactacaggcatag

DBGET integrated database retrieval system