KEGG   Vigna umbellata (ricebean): 124823699
Entry
124823699         CDS       T09662                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vum04121]
    124823699
   03400 DNA repair and recombination proteins [BR:vum03400]
    124823699
Enzymes [BR:vum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124823699
Ubiquitin system [BR:vum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124823699
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    124823699
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-ANAPC11 Prok-RING_4 ResIII zf-RING_UBOX zf-rbx1 RING_XB3-XBAT31 DEAD zf-Nse zf-C3HC4_4 Rad50_zn_hook zf-RING_6
Other DBs
NCBI-GeneID: 124823699
NCBI-ProteinID: XP_047151930
LinkDB
Position
Unknown
AA seq 816 aa
MDSGDDETGSASSSSEIFLLGFIEANIVGVQHYHATISGRAVVVLHREPDNVHDANAIKA
SNIHGDHVGYIERAVAAVLTPLIDDELITVEAIVPDARKTYRILCQIHIFARLQDFDFVK
CALSRCPCRLINESEAAFTLSDSAAVKATKAVKKTMTVDAIFSLMNSYLANKNRAIDFLE
PPRSIIRTELLPHQKEGLWWLVRREKIDDLPPFWEENDGKFVNVLTDYQTDKRPDPLRGG
IFADEMGLGKTLTLLSLIAFDKWSQMGFSKKCRTDGKWVSLEKRRRNEIEGSRGTELRTN
ATLVVCSPSAMSAWITQLEDHTVPGALKTYMYYGERRTEDTEELKKYDLVLTTYTTLSNE
LDEMPAKQMEWRRIILDEAHTIKNFTANLSKTVFRLKGQYRWAVTGTPIQSGCIDLYSFM
VFLRFQPFSERRHWRILVQTPLNLGLENGFTRLQVLMGAIALRRTKELALTFLPPKTVEI
CYVGLSMEERQLYEREKEKIKASLRRGYIRESNPLSESSEVLNSFLLLRQICVDLKLCKF
QSESEGETIISYNPELLQKLLGQLEEGEDFECPICLSPPMEIVITRCAHIFCRPCILRSL
EERKKSGCPLCRQKLSSESDIFSPPPQPETDTAELSSASEKPLSSKVSALIKCLDESRDQ
NPGVKSVVFSQFRKLLCLLEEPLNAAGFKTLRLDGKMNAKQRANVILQFQARESGCCPTV
LLASLRASSAGVNLTAASRLYFMEPWWNHAVEEQAMDRVHRIGQNQPVKIVRFIAQNSFE
EKMLVLQERRKLLLKEPYGTERKGIGYLDLKFLLDS
NT seq 2451 nt   +upstreamnt  +downstreamnt
atggattcgggagacgacgagacaggttcggcctcctcatcgtctgaaatattccttctc
ggcttcatcgaggccaacatcgtcggtgtgcagcactatcacgccaccatcagcggccgc
gccgtcgtcgtccttcaccgtgagcccgacaacgtccacgatgccaacgccatcaaagcc
agcaacatccacggggaccacgtcggttacattgaacgcgccgtcgcagccgtcctcacc
cctctcatcgacgacgaacttatcaccgtcgaagccatcgtacccgacgcccgcaaaacc
taccgaatcctctgccaaatccacatcttcgctcgcctccaagactttgacttcgtcaaa
tgtgccctttcccgttgcccctgcagactcatcaacgaatccgaggccgccttcaccctc
tctgactccgccgccgttaaagccaccaaggcggtgaagaagaccatgaccgtcgacgcc
attttcagcctcatgaacagctaccttgccaataagaaccgcgccatcgatttcttggag
cctccgaggagcatcatcagaaccgagcttctccctcaccagaaggagggtctctggtgg
ctcgttcgcagagaaaaaattgatgacttgccacccttttgggaagaaaacgatgggaag
ttcgtaaatgttttaaccgattatcagaccgataaaaggcctgaccccttgcgaggtggt
atcttcgccgatgagatggggttgggaaagaccttaactctgctttctctgattgctttt
gataaatggagccaaatgggtttctctaagaaatgtagaacggatggaaagtgggtttct
ttagagaagcgacgcaggaatgaaattgagggctcccgtggaaccgaattgagaacaaat
gcaacgttggtggtgtgttctccttctgctatgtcggcatggataacgcaattagaggat
cacactgtacctggtgcattgaagacttacatgtattacggggaaagaaggacagaggac
actgaggagcttaagaagtatgatttggtattgactacttacactactttgtccaatgaa
ttggacgagatgccggcgaagcaaatggagtggcggagaattatattggacgaagcacac
accatcaagaatttcactgctaacctgagtaagacggttttcaggttgaaaggtcagtac
agatgggctgtcacagggacaccgattcaaagtggttgcattgatttgtattcttttatg
gtctttttgcggtttcagccgttttcggaacgaagacattggagaattttggtgcaaacc
cctcttaatctgggcttggaaaacgggttcacacggttgcaggttttgatgggagcaatt
gctttgcgaagaacaaaagagttggcattgacgtttctgccacccaaaaccgttgagatt
tgttatgttgggctttctatggaagaacggcagctgtatgagagggagaaagagaaaata
aaggcatcgttgagaagaggttatatccgtgagagcaatccactttccgagtctagcgaa
gtgctaaatagttttctattactccgtcaaatctgtgttgatttgaaattgtgtaaattt
cagtcagaaagtgaaggagaaacaattatatcttataatcccgagttgctgcaaaaatta
cttggacagctggaagaaggtgaagattttgaatgtccaatctgtttatctcctccaatg
gaaattgtgatcacacgttgtgctcacattttctgtcgtccgtgtatactgagatctcta
gaagagaggaaaaaaagtggttgtcctctttgtcggcaaaaactctcatcagaatctgat
atattctcaccacctccccagccagagacagacactgctgaactgagctcagcctcagaa
aaaccgctatcgtccaaggtttctgctctgataaaatgtctggatgaatcaagagaccaa
aatccaggtgtgaagtcagttgtattttcacaatttcgaaagttgctgtgtttacttgaa
gagcctctgaatgcagctggtttcaagactctgcgtcttgatgggaaaatgaatgctaaa
cagagagccaatgttattctgcagtttcaagcccgagaaagtggttgttgtccaactgtt
ctacttgcaagcctgagggcttcaagtgcaggtgtaaatctgacagctgcctctagactc
tactttatggaaccatggtggaaccatgcagttgaggaacaggcaatggaccgtgtccac
cgcattggacagaaccagcccgtgaagattgttcgattcattgctcaaaacagctttgag
gagaaaatgttggtgttgcaggaaaggaggaaactactgttgaaagaaccatatgggacg
gaaagaaagggcattggctatctagatttgaaattccttctagattcttag

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