Vigna umbellata (ricebean): 124823838
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Entry
124823838 CDS
T09662
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
vum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124823838
09124 Replication and repair
03420 Nucleotide excision repair
124823838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124823838
03400 DNA repair and recombination proteins [BR:
vum03400
]
124823838
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124823838
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124823838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
124823838
NCBI-ProteinID:
XP_047152101
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MPSAPSKIYADDVSLLVVTLDTNPFFWATFPFPFAEFLSQVLAFLNSILLLGQLNQVIVI
ATGCNSCAYVYDSSSERNHGATTGTMPALYSNLLHNINEFLARDRQLDAIRKPGTVPSSL
LSGSLSMALCYIQRAFRLGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQRSMVPIDSC
YIGSNNSAFLQQASYITSGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDFRA
SCFCHKRTIDMGFVCSVCLSIFCEHHDKCSTCGSVFGQAQPDASAANRKRKA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgcaccttcgaaaatctacgcagacgatgtgagccttctggttgtgacgcta
gacaccaatcctttcttctgggccactttccccttccccttcgccgagttcctctcccaa
gtactcgcctttctcaactcgatcctgctcctcggccagctcaaccaggtcatcgtcatc
gccactggatgcaactcctgcgcctatgtgtacgattcctcttccgaacggaaccacggt
gccaccaccggcacaatgcccgcgctttattccaacctactccacaatatcaacgagttt
ctcgccagggaccggcaattagatgctattagaaaaccaggaaccgtgccttcttcgctc
ctatcgggctccttgtccatggcgctttgttatatacagagagcttttcgcttaggacct
atgcctccgcagcctcggattttatgtttgcaaggcgctgccgatggaccagaacagtat
gtggcaatcatgaatgcaatattctctgcacagcgttctatggttcctatagattcttgt
tatattggctccaacaactctgcattcctccagcaggcttcatacatcactagtggaata
tattacaagcctccccaattggacggactttatcaatatctttcaacagtatttgcaact
gatttacattctcgtgcatttttaaggcttcctaaatctgtgggtgtggattttcgtgca
tcgtgcttctgccataagcgaacaattgacatgggcttcgtatgttctgtatgcttgtcc
atattctgtgagcatcatgataagtgttcaacctgtgggtctgtatttggtcaagctcaa
ccagatgcttcagcagccaacaggaaaagaaaggcgtga
DBGET
integrated database retrieval system
