KEGG   Vigna umbellata (ricebean): 124824764
Entry
124824764         CDS       T09662                                 
Name
(RefSeq) WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124824764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124824764
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     124824764
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IP5PC_F ANAPC4_WD40 Beta-prop_DCAF12 WD40_RFWD3 RAWUL Beta-prop_WDR75_2nd Beta-prop_Vps41
Other DBs
NCBI-GeneID: 124824764
NCBI-ProteinID: XP_047153222
LinkDB
Position
Unknown
AA seq 762 aa
MHRVGSAGNGNNSTRPRKEKRLTYVLNDSDDTKHCAGINCLALLTSVASDVSDYLFTGSR
DGRLKRWVLDVDRATCSATFESHVDWVNDTVLVGDSTLVSCSSDTTIKLWNASSFGTCTR
TLRQHSDYVTCLAAAGKNSNVVASGGLGGEVFIWDIESALAPASKSSDATGDESSNGING
SGNLPLTSLRTNSNDNMSMHTTQTQGYIPTSAKGHKDSVYALAMNESGTILVSGGTEKVV
RVWDTRSGSKTLKLRGHTDNIRALLLDSSGRYCLSGSSDSMIRLWDIGQQRCVHSYAVHT
DSVWALASTPTFSHVYSGGRDFSLYLTDLQTRESSLVCTGEHPILQLALHDDSIWVASTD
SSVRRWPAEGCNPEKIFQSGNSFLAGNLSFSRARVSLEGSTPVPVYKEPTLTILGTPAIV
QHEVLNNKRHVLTKDASGSVKLWEITKGAVIEDYGKVSFEEKKEELFEMVSIPAWFTVDT
RLGSLSVHLDTPQCFAAEMYSADLNIVGKPEDDKVNLARETLKGLLAPWLRKRKQRSGSS
APANGELLSGKDTASRSSTHSRVEVDGSSDNDAMVYPPFEFSDTSPPSIITEGTHGGPWR
KKTTDLEGTKDDKDFPWWCLDCVLNNRLPPRENTKCSFYLQPCEGSSVQILTQGKLSAPR
ILRIHKVINYVIEKMVLDKPLDSLNAESSFSPGRAASQSQLQVVGDGSFRSGFQPWQKLK
PSIEILCNNQVLSPEMSLATVRAYVWKKSEDLILNYRLVQGR
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcaccgcgtgggtagtgctggtaatggaaacaattcaactcgtccccgcaaggagaag
agattaacctacgtgttgaatgattctgacgacactaagcattgtgcaggcataaattgt
ctggctctacttacatctgtagcatctgatgtgtctgattatctcttcactgggagtcgt
gatggcaggctaaaacgatgggtattagatgtggatagagcaacatgctcggctaccttt
gaatctcatgttgattgggttaatgatactgttcttgttggtgatagtacactcgtttct
tgttcctcagatactaccattaagctatggaatgcctcgtcctttgggacttgtacaagg
actctccgacaacactctgactatgttacttgccttgcagcggcaggaaagaatagcaat
gttgttgcttctggtggccttggtggggaggtttttatatgggatattgagtctgccctt
gctccagcctctaagagtagcgatgctactggggatgaatcttcaaatggtatcaatggt
tctggcaacttaccattgacaagcttgcgtactaactcaaatgacaatatgtctatgcac
actactcaaactcagggatatattccaacttcagccaaaggccataaagattctgtttat
gctttggctatgaatgaaagtggaacaattcttgtatctggaggcacagaaaaggttgtt
cgtgtctgggacacaaggtcaggatcaaagactctaaagctaagaggacatactgataat
atccgggctctgcttctggattctagcggcagatattgtttatcaggatcttcagactct
atgataaggctttgggatataggtcagcagagatgtgtgcattcttatgctgttcataca
gattctgtctgggcacttgccagcaccccaacatttagtcatgtttatagtggagggaga
gacttttcattatacttgacagatttgcaaactagagagagtagtttggtctgcaccggc
gagcaccctattcttcaattggctttgcatgatgatagcatatgggttgcatcaacagac
tcttcagttcgcagatggcctgctgaaggatgcaaccctgaaaagattttccagagcggc
aattcttttttagcaggaaacttgtctttttcaagagcaagagtgtctctagaaggatct
acccctgttcctgtatataaagaacctaccttaactatcttgggtacacctgcaatagta
caacatgaagttttgaataataagaggcatgtgttgacgaaggatgcttctggttcagta
aagctatgggagattaccaaaggtgccgtgattgaagattacggaaaggtttcatttgag
gagaaaaaggaagagctatttgagatggttagcattcctgcatggtttacagtggatacc
aggcttggaagtttgtctgttcatttagacactccccaatgttttgctgcagagatgtat
tcagcagatcttaacattgtaggcaagcctgaagatgataaggttaatttggctcgagaa
acccttaaaggattacttgctccttggttgagaaaacgaaagcaaagatcaggctcctca
gctccagctaatggggagttattatctggaaaggatactgcttcaagaagtagtacccat
tcaagagttgaggttgatggtagttctgataatgatgctatggtttatcccccgtttgaa
ttctcagatacctccccaccttccattattactgagggcactcatggaggtccatggagg
aaaaaaactaccgatttagaaggaaccaaggatgataaagacttcccctggtggtgtctg
gactgtgttttgaataatcggttacctcccagagaaaataccaaatgcagtttctatttg
caaccttgtgaaggctcttcagtccagattctcacacaagggaagctaagtgccccacgt
atattaagaattcacaaagttattaattatgtaatagagaagatggtgcttgacaaacct
ttggatagcttaaatgctgagtctagtttttcccctggtcgtgctgcgtcacagtcacag
cttcaagtagttggtgatggatcttttcgatctggatttcagccttggcaaaagcttaaa
ccttctattgaaatattgtgcaacaaccaggtgctgtctcctgaaatgagtttagccaca
gtgcgagcttatgtatggaagaaatcagaagacttgattctaaattacagactagttcaa
ggaaggtga

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