Vigna umbellata (ricebean): 124824817
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Entry
124824817 CDS
T09662
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124824817
Membrane trafficking [BR:
vum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124824817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124824817
NCBI-ProteinID:
XP_047153287
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MASNPPPEDQTDEDFFDKLVEDDNEHVNSGHGDEGYHNSGDVKTFANLGIDGDAGECRNE
RKQEEWDESGVQLDGGNAQEGVFLASSGSFGGDNAMDHGDHGTGLESASVSDVSKSNGIN
NSEVKEVGWNSFNVDANRDNGFGSYSDFFGELVEESGKTCNDFNNEVKSGNEIQNDGSNS
LGNYEPYQEGKGYDTSQVNKTNGQDLGSTQYWEDLYPGWKYDQNTGQWYMVDGHNDNQGS
SMANTTANWTTASDTVSEVSYMQQTAQSMVGTLAGTNRTESVSCWNQASQGNNGYPEHMV
FDPQYPGWYYDMIAQEWRSLETYHSFIQSAGHGQESRRASTEKNLSNDVSLYREYGQDGN
YGSLDAGTQTTDDKWSGSYGIHHLQGQDTHTTERATRNEDTATSGGNRPFGHSFGSNISV
NKDQQNNPASFETVSYSKVNHDHGLADGTLERQNSAPSGNIPQLFNYSNTQFNEPNNFSN
EYAKSQKPFSYSQAQPSFQDTHQSCAPDVRRSSAGRPPHALVTFGFGGKVVVMKDSSFSS
SSYRSQTSVQGSVSVLNLMEVINGSIDSSSVGSGAGDYFRALTQQSFPGPLVSGSFGNKE
LYKWIDERIAHSGSTDMDYKKCERLRLLLSLLKIACQHYGKLRSPFGTDTIRKENDTPEA
AVAKLFASAKTFGKEFTQYGVLRSHCLQNLPSEAQMRATASEVQNLLVSGKKKEALQYAQ
EGQLWGPALVLASQLGDQFYVDTVKQMALRQLVSGSPLRTLCLLIAGQPAEVFSPGSSAG
GDPNSLNIPQQPTQVGSFDMLGDWEENLAVITANRTKDDELVIIHLGDCLWRETSQIIAA
HICYLVAEANFESYSDRARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGNSQFILL
PFQPYKLIYAYMLAEVGKVSDSLKYCQAVMKCLKTGRAPEVETWKQFVLSLEDRIRTHQQ
GGYAANLAPAKLVGKLLNFFDSTAHRVVGGGLPPPAPSSSSSQGYVHGNGQHHQPVANRV
SNSQSTMAMSSLVPSASMEPISDWTADDNKTPKPNRSVSEPDFGRSPRQGTSPEGQGKTS
VSGAASRFSRFGFGSQLLQKTVELVLRPRPGRQAKLGEKNKFYYDEKLKRWVEEGVQSQS
EETALPPPPKTAAFQNGSTDYSLKHALKKEGTPSMEGYDLKTKSHEHNPGIPPMPPSSTQ
FSGRGRVGVRSRYVDTFNPGSGSSAKLFQSSSVKPDLAANAKFFVPAHTPSSNEQAMEAI
TESNHEHSLTNENPSTLYQSPGVLQRPRFPSMDTIGFQEIMTNGSNSEVPHSRRTASWGG
EAISDRFSSTELGENSSLGEALGMPPTMFQEVQL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccaccggaggatcagacggacgaggattttttcgataaacttgtg
gaggatgacaatgaacatgttaattctggccatggtgatgaaggttatcataattctggt
gacgtgaaaacgtttgcgaatttagggatcgatggtgatgctggagaatgtcggaatgag
aggaaacaggaagaatgggacgaaagcggtgtgcaattggatggtgggaatgcccaagaa
ggagtttttttggcgtcctctggttcatttggaggtgataatgcgatggatcatggtgat
catgggacgggtttggagagtgcgtcagtttccgatgtgagtaagagcaatgggatcaac
aattccgaggttaaggaggtgggttggaattcttttaatgttgatgcaaatcgagataat
ggatttggatcgtattctgacttctttggtgaattggtagaagaatctggcaaaacatgt
aatgatttcaataatgaggtgaaatccggtaatgaaattcaaaatgatgggtcaaattct
ttaggtaattatgagccatatcaagagggtaaaggttacgatacatctcaggtaaataaa
acaaatgggcaagatctgggtagcactcagtactgggaggatctttatcctggctggaag
tatgatcagaacactgggcaatggtatatggtagatggccataatgataatcagggaagc
tctatggccaatacaactgcaaattggacaactgcttctgatactgtatcggaggtttct
tatatgcaacaaactgcgcaatctatggttggaactttagctgggactaacagaactgaa
agtgtatcatgctggaaccaagcttcgcaggggaataatgggtatcctgaacatatggtt
tttgatcctcagtatcccggttggtattatgacatgattgctcaagaatggcgctcgtta
gaaacttaccattcatttattcaatctgctggtcatggacaggaaagtaggcgtgcttct
actgaaaaaaatttgtccaatgatgtcagtttatatagagagtatggtcaagatggtaat
tatgggtcacttgacgctggtactcagactacagatgacaagtggagtggttcatatggt
attcaccatctccagggtcaagacacacacacaactgagagggctactagaaatgaggat
actgcaacttctggtggaaacagaccatttgggcattcttttggctcaaatatttctgtt
aataaagatcaacaaaataaccctgcctcatttgaaacagtttcgtacagtaaagtgaac
catgatcatggtttggctgatggaactcttgagagacaaaactctgctcccagtgggaac
attcctcaactttttaattattcaaatacacagtttaatgaaccaaacaatttctcaaat
gaatatgctaaaagtcagaagcccttcagttactcccaggcacagccatcgttccaggat
acgcatcagtcttgtgcacctgatgttagaagatcatcagctggacgtcctcctcatgcc
ttagtaacctttggatttggtggaaaagtcgttgtaatgaaagattctagtttttcgagt
tcatcatatagaagccagacttctgtccaaggatctgtttctgtgttaaacttgatggaa
gttatcaatggaagtattgattcttcgagcgttggaagtggcgctggtgattatttccgt
gctctcactcagcaatctttccctggtccattggttagtggaagttttggaaataaagag
ttgtacaaatggatagatgagaggattgcacattctggatcaactgacatggattataag
aaatgtgaaaggttgagacttcttctctccttgcttaaaatagcctgtcaacattatgga
aaactacgttctccttttggtacagacaccatacgaaaagaaaatgatactcctgaagca
gcagttgcaaagctttttgcatctgccaagacgtttggcaaggagttcactcaatacggt
gtgctaagaagtcactgtctgcaaaatttgccttctgaagctcaaatgcgggcaacggct
tctgaggtacaaaaccttcttgtctctggaaaaaagaaggaggctttgcagtacgcacaa
gaaggtcaattgtggggacctgcgcttgttcttgcttcacaacttggcgatcagttctat
gttgacacagtgaagcaaatggcacttcgtcagctagtttcaggatcacctttgcgcaca
ttatgccttctaatcgctggacagccagctgaagtattctctcctggtagctcagctggt
ggggatcctaactctttgaatatccctcagcagcctacacaggttggatcttttgacatg
cttggtgattgggaggagaatttggctgtaataactgcaaacagaaccaaagatgacgaa
cttgtaattattcatcttggtgattgcttgtggagagaaacaagtcagatcattgctgca
cacatatgctatttagttgctgaagcgaacttcgaatcatactcagatagggcaaggctc
tgtctaattggagcagatcactggaaatttcctcgaacttatgctagtccagaggctatc
cagaggactgaattatatgaatattcaaaggtgcttggaaactctcagtttattttgctt
ccatttcagccatataagcttatttatgcatacatgctagctgaagtgggaaaggtttca
gactcgctgaagtactgccaagcagtaatgaaatgcttaaaaactggtcgtgcaccagaa
gtagaaacatggaagcagttcgtattatctcttgaagacaggattagaacccaccaacag
ggtgggtatgccgcaaatttggcacctgcaaaattagtgggaaaattgctcaactttttt
gatagtactgcacatcgagttgttggtggtggtttaccaccacctgctccatcatcgtca
tcatctcaaggatatgttcacggaaatggacaacatcaccagcctgttgcaaacagagta
tcgaatagccaatcaacaatggcaatgtcatccttagttccatccgcttcaatggaaccc
atcagtgattggacagctgacgataataaaacaccaaaacctaatagaagtgtttcagag
ccagactttggtagaagccctcgccagggaacttcacctgaaggtcaaggaaaaacatca
gtatcaggggctgcatctcgcttttctcgttttggttttggctcacaactattacaaaag
acagtggaactagttttgagacctcgccccggtcgacaggctaaattgggtgaaaagaac
aagttttattatgatgaaaaactgaaaagatgggtagaggaaggcgttcaatctcaatct
gaagaaactgcattaccaccgcctccaaagactgctgctttccagaatggttcaactgac
tacagcttaaaacatgcactgaagaaagaaggaacgccttctatggagggatatgattta
aaaacaaaaagtcatgaacataatccagggattccaccaatgccaccaagctcaacacaa
ttctctggccgaggtcgcgttggtgttcgatcaaggtacgttgacacgttcaaccctggt
agtggaagctctgcaaaattgtttcagtcatcatctgtcaaacctgatctggctgccaat
gcaaagttttttgttcctgctcacacaccatcatcaaatgagcaggcaatggaagctata
acagaaagtaatcatgaacatagtttaactaatgaaaatccttcaacgttgtaccaatcg
cctggagttttacaacggccaaggtttccaagcatggatactattggtttccaggaaata
atgacgaatggcagcaactctgaagttcctcattcacggcgaacagcttcgtggggtggt
gaggctattagtgatcgatttagttccacagaattgggagaaaatagttctcttggtgaa
gctttgggaatgccaccaacaatgtttcaagaggttcaactttga
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