Vigna umbellata (ricebean): 124825768
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Entry
124825768 CDS
T09662
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vum03016
]
124825768
Enzymes [BR:
vum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
124825768
Transfer RNA biogenesis [BR:
vum03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
124825768
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
124825768
NCBI-ProteinID:
XP_047154423
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MAVRAVATCSLFRPSSPPLLSSALRLFSSPSRCSCSLRHGAKTYHRSFHSVFDSVMEELR
AARRSRHKRVSAAGSSTGLLNEELVEDRLVNRSLQKGLLLEFKKDSDRVLLAVAQRPDGK
KNWMVSDQNGVTSSIKLQQVTYIVPGIDNFDQADITDFALKAQDNMDPSLLEYAWVELLE
KNKSVTVEELAEIIFGSTEPLDSYSAHLLLSKDEVYFTVLETKGSRSIYGPRPSRQVEEL
IHRKLAKEAAEKEFLEFIELLASVKSMSLQDKPPKSSWTNDEKNWRRIESLVAYAIDSCK
SDEQRKTAGMILKELGLAKTSSSAVKLLIDIGYFPVHINLDLLRSGIPTDHSEEIISAAE
SLLLDTSDPDKIDRKNLTDLKVYAIDVDEADELDDALSATKLQDGRIQVWIHVADPTRYV
QPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGGMSLRQGELCNAVTVSVVLHYDGSIA
EYSVFNSVIKPTYMLTYESASELLHLNLQEEGELRILSEAANLRSNWRRQQGAIETSTLD
TRIKVFNPEDPEPSLKLYVENQADPAMRLVFEMMILCGEAIATFGSQNDIPLPYRGQPQS
DINVSEFSHLPEGPVRSFALVRVMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLA
HYQVKAFLRGELPPFTAGKLEGIAAVINENVRTVRKLCNSSLRYWILEYLRRQPKEKSYR
ALVLRFLKDRIAALLLVEIGFQASAWVPVGSQIGDEVLVKVEEAHPRDDILFLKEVVKE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggccgtacgggcagttgccacctgctccctcttccgcccttcctctccgcccctctta
tcctccgccctccgcctcttctcctctccctcccgctgctcctgctccctccgtcatggc
gccaaaacctaccaccgctccttccactccgtattcgacagcgtcatggaagagctccgt
gcggctcgcagaagccgccacaagcgtgtctccgccgcgggttccagcacgggattgttg
aatgaagagcttgttgaagatagacttgtaaaccgttcattgcagaaagggttgcttttg
gaattcaagaaggattctgatagagtattgctagcagtagctcaaagacctgatggcaag
aagaactggatggtttctgatcagaatggtgtcacttcttccatcaaactgcagcaagtg
acatatatcgttcctggtattgataattttgaccaagcagatatcacagattttgctcta
aaggctcaggataacatggacccgtctctactggaatatgcttgggttgagctcctagaa
aagaataagtctgtcacagttgaagagttggccgagataatttttggcagcaccgagccc
cttgacagctattctgctcatctcttgctatcaaaagatgaagtatactttactgtattg
gagactaaaggatctcgttccatttacggacctcgaccaagtaggcaggttgaggagctc
attcacaggaagcttgcaaaggaggctgctgagaaagaatttttagagtttattgaatta
ctggcctctgtgaagtccatgtctttacaagataaacctccaaaatcttcctggaccaat
gatgaaaaaaattggaggagaattgagtcacttgtagcatatgctattgattcatgtaaa
agtgatgaacaaagaaaaacagctgggatgatactgaaggaattgggtctggcaaagaca
agttcctcagccgttaaacttctgatagatattggatattttcctgtacatatcaatctt
gatctgttgagatccggaattcccactgatcattcagaagaaatcatatctgctgcagag
agtcttttattggacacatctgatccagacaagattgacaggaagaatcttactgattta
aaggtctatgccattgatgttgatgaggctgatgagcttgatgatgctttgagtgcaaca
aagttgcaagatggccggattcaagtttggatacatgttgcagatccaactagatatgtt
caacctggaagtatagtggacagagaggctatgagaagaggaacttccgttttcttgccc
actgctacatattctatgtttccagaaaatcttgccatggggggcatgagtttgcgacaa
ggagagctttgtaatgcagttactgtatcagttgtgctgcattatgatggcagcattgca
gaatattcagtttttaactcagtgattaaaccaacatacatgctgacatatgagagtgca
tccgagctactccatttgaatcttcaggaggagggtgagctcagaattttgtctgaggct
gcaaaccttagatcaaattggcgtcgtcaacagggtgccattgagacgtcaactttagat
actcggattaaagtatttaatccagaggatccagagccatcattaaaactttatgtggaa
aaccaggcagatcctgccatgcgtttagtctttgagatgatgatactctgtggagaagct
attgccacgtttggatctcagaatgacattcccttaccatacaggggacagccccaatca
gatataaatgtttccgaattttcccatcttccagaaggacctgttaggagctttgcactg
gtcagggtaatgcgtgcggctgaaattgattttaggaagccagcacgccatggtgttttg
gggattcctggttatgttcagtttacatctcccatccgtagatatttggatcttcttgca
cattatcaagtaaaggcattccttagaggcgagcttccaccctttacagctggtaagctt
gaagggatagcagctgttatcaatgagaatgttagaacagtgaggaaactctgcaacagc
agtcttcgatactggatattagaatatttacgaagacaaccaaaagagaaatcgtatcgt
gcattggttcttagatttttgaaagatcgaattgcagctctattgctggtggagattgga
tttcaagcttctgcctgggtccctgttggatcacagataggggatgaagtattagttaaa
gtggaagaagcgcatccgcgtgatgatattctttttctgaaggaggttgtaaaagagtga
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