KEGG   Vigna umbellata (ricebean): 124825814
Entry
124825814         CDS       T09662                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124825814
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vum04121]
    124825814
   03036 Chromosome and associated proteins [BR:vum03036]
    124825814
Enzymes [BR:vum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124825814
Ubiquitin system [BR:vum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124825814
Chromosome and associated proteins [BR:vum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     124825814
    Noncanonical PRC1 (PRC1.1)
     124825814
    Noncanonical PRC1 (PRC1.3/1.5)
     124825814
    Noncanonical PRC1 (PRC1.6)
     124825814
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-Nse zf-RING_6 zf-RING_11 zf-RING_10 zf-C3HC4_5
Other DBs
NCBI-GeneID: 124825814
NCBI-ProteinID: XP_047154482
LinkDB
Position
Unknown
AA seq 454 aa
MPAQKRSFPDSPHDHHRHTKHHHQEKTEEEEDAQQQEQDNYESNGSDSHRPPSSPSEDNS
EFVFVELLEIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRMGNNECPACRTHCA
SRRSLRDDPNYDALIAALYPDIEKYEEEELEFREEDKNRNKLIQASIAKVVQRQSEALVK
RRRDTPGSFVTRAQRNQRNVLSRRQNQVMDNQGSEDNEDENDNNEKDSSSTDERCTEIRQ
RRRKRRTRVRPSQPSSSTASPDRGCIESDVDIRENRGISSRPLSKPQKLTWGRGGFRSHT
RHGSGSGNGINSKSARSSRLAKLVDYLRNLNENTDELDVHLILFSLDKQSTPSLQQPHLC
CRPTLSVKHLCEYVAGQTSLPIEEIEILAVKGCCSTVYEKPFDEISSFDEQTALIIDPSK
DELETLQGHESLTELKSKCISQRAHMILAYRRKE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgcccgctcagaagcgttccttccctgattctcctcacgatcaccaccgtcacaccaaa
catcaccaccaagaaaaaaccgaagaagaagaagatgcacaacaacaagaacaggataat
tatgaatcaaacggctcagattctcaccgccctccgtcttctccctccgaagacaattcc
gaatttgtttttgtagagcttctcgaaatacgtaaagaagtccaatgtccaatttgcctt
ggtattattaagaagacacgaacagttatggaatgcttgcaccggttttgcagagaatgc
attgacaagtcgatgcgaatggggaacaatgaatgcccggcttgtcggacacactgtgcc
agtcgtcgttctttgagagatgatccaaactacgatgctctgattgcagctttatatcca
gacattgagaagtacgaggaagaggagcttgagtttcgtgaagaggacaagaaccgcaat
aagctgattcaagcttcaattgcaaaagttgttcaacgacaatcagaagcactggttaag
agacgcagagatacaccaggttcatttgtaacaagagcacagcgcaatcaacgaaatgtc
ctttctaggagacaaaaccaagtaatggataatcaaggatctgaggataatgaggatgaa
aatgataacaatgaaaaggactcatcttccacggatgagcgatgtacagaaattaggcag
agaaggcgaaagaggcggacccgagttcgcccttctcagccatcatcatcgacagcaagt
cctgacagaggatgcatagaaagtgatgtggacataagagagaatcgaggaatttcttct
agaccgttgtcaaaacctcaaaagctaacatgggggaggggtggttttaggagtcacaca
cggcatggcagtggcagtggcaatggtatcaatagcaaaagtgcccgcagtagccgcttg
gcgaagttagttgattatctccgtaatttgaatgaaaacaccgatgagttagatgttcat
ctcattcttttctctctggacaaacaaagtacaccaagcttgcagcagccacacctttgc
tgtcgaccaactttgtcagtgaagcacctttgtgagtatgttgctggccagacatctttg
ccaattgaagaaattgagatattggcagttaaaggatgctgcagtacagtttatgaaaag
ccatttgacgagatttcatcctttgatgagcaaacggcactgataatagatcctagcaaa
gatgaactggaaactctgcaagggcatgaatctttgacagaacttaaatccaaatgcata
tctcaaagggcgcatatgattctggcatacaggcggaaggagtga

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