KEGG   Vigna umbellata (ricebean): 124825936
Entry
124825936         CDS       T09662                                 
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum00260  Glycine, serine and threonine metabolism
vum00460  Cyanoamino acid metabolism
vum00630  Glyoxylate and dicarboxylate metabolism
vum00670  One carbon pool by folate
vum01100  Metabolic pathways
vum01110  Biosynthesis of secondary metabolites
vum01200  Carbon metabolism
vum01230  Biosynthesis of amino acids
vum01240  Biosynthesis of cofactors
vum04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:vum00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    124825936
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    124825936
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    124825936
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    124825936
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    124825936
Enzymes [BR:vum01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     124825936
SSDB
Motif
Pfam: SHMT Beta_elim_lyase DUF6325
Other DBs
NCBI-GeneID: 124825936
NCBI-ProteinID: XP_047154639
LinkDB
Position
Unknown
AA seq 526 aa
MQACTMMGSLQQSVWTKGMGFPAKGYGNNCGFVSEVKFCNMKPCKASPVEGSLVTGKPSS
LSFSVPEIGGDGSSFLDHGLTEADPEVRAIIDKEKDRQFKSLELIASENFTSRAVMEAVG
SCLTNKYSEGLPGKRYYGGNEYIDELETLCQQRALAAFHVDGTKWGVNVQPLSGSPANFA
VYTAVLKPHDRIMGLDLPHGGHLSHGFMTPKKRVSATSIYFESMPYRLDESTGLIDYDML
EKTANLFRPKLIIAGFSAYPRDIDYPRMRKIADEVGAFLMMDMAHISGLVAASVLASPFD
YCDIVTTTTHKSLRGPRGGMIFFKKDPVHGVDLEPAINNSVFPGLQGGPHNHTIGGLAVC
LKYAQSPEFKNYQNKVVANCRALAQRLIEHGYKLVSGGSDNHLVLVDLRPSGLDGARVEK
ILDMASITLNKNSVPGDKSALVPGGIRIGAPAMTTRGLGEKEFALIADLIHEGVQISLEA
KSLVSGTKLQEFLKFVSSSEFPLGGKVSELRRKVEALTIQYPIPGV
NT seq 1581 nt   +upstreamnt  +downstreamnt
atgcaagcttgtacaatgatgggttctctgcaacaatctgtttggaccaaggggatgggt
ttccccgcaaaggggtatggcaataactgcgggtttgtatctgaagtgaagttctgcaat
atgaagccatgcaaagcttcccctgttgaagggagtttagtcactgggaagccgtcgtct
ctgtctttctctgttcctgaaattggaggtgatggaagtagcttcctggaccatggcttg
actgaagccgatcctgaggttcgtgcaattattgacaaggagaaggaccggcaatttaaa
agtcttgagcttattgcttctgagaattttacatctagagctgtgatggaagcagttggt
tcatgcctcacaaacaagtattcagaaggattgccgggtaaaaggtactatggtgggaat
gagtacattgatgagctcgaaaccctatgccaacaaagggcactggccgcatttcatgta
gatggaaccaaatggggtgttaatgttcaaccattatctggatccccagctaattttgca
gtatacactgcagttcttaaaccacatgatcgaattatgggtttggacttgcctcatgga
ggacatttgtcccatggattcatgacgcctaaaaaacgtgtatctgctacttcaatttat
tttgaatctatgccttatcgacttgacgaatcaacaggtctaattgattatgatatgctg
gagaaaactgctaatctcttcaggccaaagctgattattgcggggtttagtgcttatcct
cgggacattgattaccctcgcatgagaaaaattgcagatgaagtaggtgcttttcttatg
atggatatggctcatataagtgggcttgttgctgcatctgtacttgctagtccctttgac
tattgtgatattgtgaccaccacaacccacaagtctttaagaggtccaagaggtggtatg
atattcttcaagaaagatcctgtgcatggggttgatctggagcccgccattaacaattct
gtttttcccggtctacaggggggtcctcataaccacacaattggaggactagcagtttgc
ttgaagtatgcccagtctccagagtttaaaaattaccagaataaggtggttgctaactgt
agagctcttgctcagcggttaattgagcatggatataaactggtttctggtggtagtgac
aatcacctggttcttgttgatctaaggccttctggtcttgatggtgctcgggtggagaaa
attcttgatatggcttctataaccctcaacaaaaattcagtgcctggtgataagagtgcc
cttgttccgggaggcattcgcattggggcacctgccatgacaacaagaggacttggtgag
aaagaattcgcactaattgcagatttaattcatgagggagtgcaaataagtcttgaagcc
aaaagtttggtctcaggaacgaagctccaagagtttttgaagtttgtatcatcttctgaa
tttcccttggggggaaaggtctcagaattgcgcagaaaagttgaagctcttactattcag
tatccgatacccggagtctga

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