Vigna umbellata (ricebean): 124826352
Help
Entry
124826352 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 38-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
vum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124826352
03015 mRNA surveillance pathway
124826352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124826352
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124826352
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124826352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
124826352
NCBI-ProteinID:
XP_047155124
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MAEPSTAAATTTAVDPQPPVTKRWADEADEETEASSTATATEASSVNLDSLKIEDNDKNP
PKLLDDPDDSSIQKVTSGETPYTSAAKFEDLNLSPELLKGLYVEMKFKKPSKIQAISLPM
ILNPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKVQAPQALCVCPTRELANQNIEVLRKM
GKYTGIASECAVPTDSNALSIAKRAPIMAQVVIGTPGTIKKWMSFKKLGAARLKILVFDE
ADQMLAEDGFKDDSLRIMKEIEKVNSNCQVLLFSATFNDTVKNFVSRTVKEDHNKLFVKK
EELSLDAVKQYKVYCSDELAKIEVIKDYIFEIGENVGQTIIFVRTRNSAQMLHKSLVDMG
YEVTSIQGALGHDEREKIVKEFRDGLTPVLISTDLLARGFDQQTVLGLTWIPNKHTASYT
REPEPDCEVYLHRVGRAGRFGRKGAVFNLICDQKDERLMSKIENHFGTRVAEVRAQSVED
YKRALKEAGLLQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccatccaccgccgccgccaccaccaccgcggtggaccctcagccgccagtt
accaaaagatgggctgacgaagcggacgaagaaaccgaagcctcctccaccgccaccgcc
actgaagcatcttccgtcaacctcgattcattaaaaatcgaagacaacgataagaaccct
cccaaactcttggatgaccccgacgattctagcatccaaaaggttacctctggagaaacg
ccgtacacgtcggctgcgaagttcgaggacttaaacctctcgccggagcttctgaaaggg
ctctacgtggagatgaagttcaagaagccgagcaagatccaggcgataagtttgccgatg
atcctcaacccgccgcaccgcgacctcatcgcgcaggcgcacaacgggtctgggaagacc
acgtgcttcgtgcttgggatgctcagccgcgtcgatcccaaggtgcaggcgccgcaggct
ctctgtgtctgccctactcgggagttggctaatcagaacatcgaggttctccgcaagatg
gggaagtacaccgggattgcgtcggaatgcgctgtgccgacggatagcaatgcgctctcg
atcgcgaaaagggcgccgattatggcgcaggtggtgatcggaacccctggcaccatcaag
aagtggatgagcttcaagaaacttggggccgccaggttgaagattcttgtttttgacgag
gcagatcaaatgcttgcggaggatggatttaaagatgattccctgaggataatgaaagaa
atagaaaaagtcaattctaattgtcaggttcttctgttttctgctacatttaatgacacc
gtcaagaatttcgtttcaaggacagtcaaagaggatcataataaactttttgtaaagaaa
gaagaactatctttagatgcagtgaagcaatataaagtctactgttctgatgaacttgcg
aagattgaagtgataaaagattacatatttgaaataggagagaatgtggggcaaaccatc
atatttgtgcgtacaagaaatagtgcacaaatgttgcataaatcacttgttgacatgggc
tacgaggttacatctatacaaggtgctcttggtcatgacgagagagagaaaattgttaag
gagttcagagatggtttgactccagttcttatttcaactgatcttctagctcgtggcttt
gatcagcaaacagtactgggtcttacttggattcctaacaaacacactgccagctatacc
cgtgaacctgagcctgattgtgaagtgtatttgcatagggttggcagagctgggcgcttt
gggcgcaaaggggctgtatttaacctgatttgtgatcaaaaggatgaaaggctcatgtcg
aagattgagaatcacttcggcactcgtgtagctgaggtgcgagcacaaagtgttgaagac
tataaacgtgctctcaaggaagccggtttactgcaatga
DBGET
integrated database retrieval system
